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不同共生效率的根瘤菌菌株的竞争力和系统发育关系:通过自然共生基因转移将寄生性根瘤菌转化为非寄生性根瘤菌

Competitiveness and Phylogenetic Relationship of Rhizobial Strains with Different Symbiotic Efficiency in : Conversion of Parasitic into Non-Parasitic Rhizobia by Natural Symbiotic Gene Transfer.

作者信息

Morel Revetria María A, Berais-Rubio Andrés, Giménez Matías, Sanjuán Juan, Signorelli Santiago, Monza Jorge

机构信息

Laboratorio de Bioquímica, Facultad de Agronomía, Universidad de la República, Av. Garzón 780, Montevideo 11300, Uruguay.

Laboratorio de Microbiología de Suelos, Facultad de Ciencias, Universidad de la República, Igua 4225, Montevideo 11400, Uruguay.

出版信息

Biology (Basel). 2023 Feb 3;12(2):243. doi: 10.3390/biology12020243.

Abstract

In Uruguayan soils, populations of native and naturalized rhizobia nodulate white clover. These populations include efficient rhizobia but also parasitic strains, which compete for nodule occupancy and hinder optimal nitrogen fixation by the grassland. Nodulation competitiveness assays using -tagged strains proved a high nodule occupancy by the inoculant strain U204, but this was lower than the strains with intermediate efficiencies, U268 and U1116. Clover biomass production only decreased when the parasitic strain UP3 was in a 99:1 ratio with U204, but not when UP3 was at equal or lower numbers than U204. Based on phylogenetic analyses, strains with different efficiencies did not cluster together, and U1116 grouped with the parasitic strains. Our results suggest symbiotic gene transfer from an effective strain to U1116, thereby improving its symbiotic efficiency. Genome sequencing of U268 and U204 strains allowed us to assign them to species , the first report of this species nodulating clover, and , respectively. We also report the presence of - and -like genes in the genomes of WSM597, U204, and U268 strains, which are related to symbiotic efficiency in rhizobia. Interestingly, we report here chromosomally located -like genes.

摘要

在乌拉圭的土壤中,本地和归化的根瘤菌种群能使白三叶草结瘤。这些种群中既有高效的根瘤菌,也有寄生菌株,它们竞争根瘤占据权,阻碍草地的最佳固氮作用。使用标记菌株进行的结瘤竞争力试验证明接种菌株U204的根瘤占据率很高,但低于中等效率的菌株U268和U1116。只有当寄生菌株UP3与U204的比例为99:1时,三叶草生物量产量才会下降,而当UP3数量等于或低于U204时则不会下降。基于系统发育分析,不同效率的菌株没有聚集在一起,U1116与寄生菌株归为一类。我们的结果表明共生基因从一个有效菌株转移到了U1116,从而提高了它的共生效率。对U268和U204菌株进行全基因组测序,使我们能够将它们分别归为物种和物种,这是该物种使三叶草结瘤的首次报道。我们还报告了WSM597、U204和U268菌株基因组中存在与根瘤菌共生效率相关的和类似基因。有趣的是,我们在此报告了位于染色体上的类似基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6405/9953144/825ad4bffdbf/biology-12-00243-g001.jpg

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