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从先天性法洛四联症患者中鉴定出的基因启动子遗传变异改变了细胞功能,形成疾病基础。

Genetic Variants of Gene Promoter Identified from Congenital Tetralogy of Fallot Patients Alter Cellular Function Forming Disease Basis.

机构信息

The Institute of Cardiovascular Diseases & Department of Cardiovascular Surgery, TEDA International Cardiovascular Hospital, Tianjin University & Chinese Academy of Medical Sciences, Tianjin 300457, China.

School of Pharmacy, Drug Research & Development Center, Wannan Medical College, Wuhu 241002, China.

出版信息

Biomolecules. 2023 Feb 13;13(2):358. doi: 10.3390/biom13020358.

DOI:10.3390/biom13020358
PMID:36830727
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9953631/
Abstract

Tetralogy of Fallot (TOF) is the most common cyanotic congenital heart disease in newborns. is a master transcription factor in second heart field development, whereas the roles of gene promoter variants in TOF patients have not been genetically investigated. Total DNA extraction from 601 human subjects, including 308 TOF patients and 293 healthy controls, and Sanger sequencing were performed. Four variants (including one novel heterozygous variant) within the gene promoter were only found in TOF patients. Functional analysis of DNA sequence variants was performed by using the dual-luciferase reporter assay and demonstrated that three of the four variants significantly decreased the transcriptional activity of gene promoter in HL-1 cells ( < 0.05). Further, the online JASPAR database and electrophoretic mobility shift assay showed that the three variants affected the binding of transcription factors and altered expression levels. In conclusion, the current study for the first time demonstrated that the variants identified from the gene promoter region are likely involved in the development of TOF by affecting the transcriptional activity and altering the expression level. Therefore, these findings may provide new insights into the molecular etiology and potential therapeutic strategy of TOF.

摘要

法洛四联症(TOF)是新生儿中最常见的发绀性先天性心脏病。 GATA4 是心脏第二场发育的主要转录因子,而 基因启动子变异在 TOF 患者中的作用尚未进行基因研究。从 601 个人类受试者中提取总 DNA,包括 308 例 TOF 患者和 293 例健康对照,并进行 Sanger 测序。仅在 TOF 患者中发现了 基因启动子内的四个变体(包括一个新的杂合变体)。通过双荧光素酶报告基因检测对 DNA 序列变体进行功能分析,结果表明,四个变体中的三个显著降低了 HL-1 细胞中 基因启动子的转录活性(<0.05)。此外,在线 JASPAR 数据库和电泳迁移率变动分析显示,这三个变体影响了转录因子的结合并改变了 的表达水平。总之,本研究首次表明,从 基因启动子区域鉴定的变体可能通过影响转录活性和改变 的表达水平而参与 TOF 的发生发展。因此,这些发现可能为 TOF 的分子病因学和潜在治疗策略提供新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/c2155993fa17/biomolecules-13-00358-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/d400d6533de6/biomolecules-13-00358-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/20d22c1a464d/biomolecules-13-00358-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/180fd22851a5/biomolecules-13-00358-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/d8872f7bc04d/biomolecules-13-00358-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/c2155993fa17/biomolecules-13-00358-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/d400d6533de6/biomolecules-13-00358-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/20d22c1a464d/biomolecules-13-00358-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/180fd22851a5/biomolecules-13-00358-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/d8872f7bc04d/biomolecules-13-00358-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/818c/9953631/c2155993fa17/biomolecules-13-00358-g005.jpg

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本文引用的文献

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Clin Genet. 2022 Nov;102(5):391-403. doi: 10.1111/cge.14201. Epub 2022 Aug 2.
2
Functional significance of novel variants of the MEF2C gene promoter in congenital ventricular septal defects.MEF2C基因启动子新变体在先天性室间隔缺损中的功能意义
Am J Med Genet A. 2022 Aug;188(8):2397-2405. doi: 10.1002/ajmg.a.62871. Epub 2022 Jun 20.
3
Activation of PI3K/p110α in the Lung Mesenchyme Affects Branching Morphogenesis and Club Cell Differentiation.
发现某基因作为先天性心脏缺陷的一个新的潜在基因。 (注:原文中“as a new gene...”前缺少具体基因名称,此译文是根据通用表达补全后的意译,使句子完整通顺)
Am J Transl Res. 2024 Jan 15;16(1):109-125. doi: 10.62347/IVRF4475. eCollection 2024.
4
Genetic Alterations of Transcription Factors and Signaling Molecules Involved in the Development of Congenital Heart Defects-A Narrative Review.参与先天性心脏病发生发展的转录因子和信号分子的基因改变——一篇叙述性综述
Children (Basel). 2023 Apr 29;10(5):812. doi: 10.3390/children10050812.
肺间充质中PI3K/p110α的激活影响分支形态发生和克拉拉细胞分化。
Front Cell Dev Biol. 2022 May 23;10:880206. doi: 10.3389/fcell.2022.880206. eCollection 2022.
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