Department of Biochemistry and Molecular Biology, University of Kansas Medical Center, Kansas City, KS 66103, USA.
University of Kansas Cancer Center, Kansas City, KS 66103, USA.
Genes (Basel). 2023 Jan 21;14(2):281. doi: 10.3390/genes14020281.
Telomere biology disorders (TBDs) are a spectrum of diseases that arise from mutations in genes responsible for maintaining telomere integrity. Human telomerase reverse transcriptase (hTERT) adds nucleotides to chromosome ends and is frequently mutated in individuals with TBDs. Previous studies have provided insight into how relative changes in hTERT activity can lead to pathological outcomes. However, the underlying mechanisms describing how disease-associated variants alter the physicochemical steps of nucleotide insertion remain poorly understood. To address this, we applied single-turnover kinetics and computer simulations to the TERT (tcTERT) model system and characterized the nucleotide insertion mechanisms of six disease-associated variants. Each variant had distinct consequences on tcTERT's nucleotide insertion mechanism, including changes in nucleotide binding affinity, rates of catalysis, or ribonucleotide selectivity. Our computer simulations provide insight into how each variant disrupts active site organization, such as suboptimal positioning of active site residues, destabilization of the DNA 3' terminus, or changes in nucleotide sugar pucker. Collectively, this work provides a holistic characterization of the nucleotide insertion mechanisms for multiple disease-associated TERT variants and identifies additional functions of key active site residues during nucleotide insertion.
端粒生物学疾病(TBDs)是一组由负责维持端粒完整性的基因发生突变而引起的疾病。人端粒酶逆转录酶(hTERT)在染色体末端添加核苷酸,并且在 TBD 患者中经常发生突变。先前的研究提供了关于 hTERT 活性的相对变化如何导致病理结果的深入了解。然而,描述疾病相关变异如何改变核苷酸插入的物理化学步骤的潜在机制仍知之甚少。为了解决这个问题,我们将单轮动力学和计算机模拟应用于 TERT(tcTERT)模型系统,并对六种疾病相关变体的核苷酸插入机制进行了表征。每个变体对 tcTERT 的核苷酸插入机制都有独特的影响,包括核苷酸结合亲和力、催化速率或核糖核苷酸选择性的变化。我们的计算机模拟提供了对每个变体如何破坏活性位点组织的深入了解,例如活性位点残基的位置不合适、DNA 3'末端的不稳定或核苷酸糖的构象变化。总的来说,这项工作对多种疾病相关的 TERT 变体的核苷酸插入机制进行了全面的描述,并确定了在核苷酸插入过程中关键活性位点残基的额外功能。