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非洲遗传性视网膜营养不良基因分析中的挑战与机遇:文献综述

Challenges and Opportunities in the Genetic Analysis of Inherited Retinal Dystrophies in Africa, a Literature Review.

作者信息

Onyango Oscar, Mureithi Marianne, Kithinji Dennis, Jaoko Walter, Fujinami Kaoru

机构信息

Department of Ophthalmology, Kenyatta National Hospital, Nairobi P.O. Box 20723-00202, Kenya.

KAVI-Institute for Clinical Research, University of Nairobi, Nairobi 00202, Kenya.

出版信息

J Pers Med. 2023 Jan 29;13(2):239. doi: 10.3390/jpm13020239.

Abstract

Inherited retinal dystrophies (IRDs) are a global problem that is largely unaddressed, especially in Africa. Black indigenous Africans are rarely represented in research that develops genetic tests and genetic therapies for IRDs, yet their genomes are more diverse. The aim of this literature review is to synthesize information on the IRD genetic research conducted among indigenous black Africans to identify challenges and opportunities for progress. PubMed was searched to identify empirical publications reporting the genetic analysis of IRDs among indigenous Africans. A total of 11 articles were selected for the review. Based on the information in the articles, the main genetic testing methods in use include next-generation, whole exome, and Sanger sequencing. The main IRDs characterized by the genetic tests include retinitis pigmentosa, Leber Congenital Amaurosis, Stagardt disease, and cone dystrophy. Examples of implicated genes include , and for the four IRDs, respectively. Research activities on the genetics of IRDs are generally scanty in Africa. Even in South Africa and North Africa where some research activities were noted, only a few indigenous black Africans were included in the study cohorts. There is an urgent need for genetic research on IRDs, especially in East, Central, and West Africa.

摘要

遗传性视网膜营养不良(IRDs)是一个全球性问题,在很大程度上未得到解决,尤其是在非洲。非洲本土黑人在针对IRDs开展基因检测和基因治疗的研究中很少被纳入,但他们的基因组更加多样化。这篇文献综述的目的是综合关于在非洲本土黑人中开展的IRD基因研究的信息,以确定取得进展的挑战和机遇。检索了PubMed以识别报告非洲本土人IRD基因分析的实证出版物。总共选择了11篇文章进行综述。根据文章中的信息,目前使用的主要基因检测方法包括新一代测序、全外显子测序和桑格测序。基因检测所确定的主要IRDs包括色素性视网膜炎、莱伯先天性黑矇、斯塔加特病和视锥细胞营养不良。涉及的基因实例分别包括这四种IRDs的[具体基因1]、[具体基因2]、[具体基因3]和[具体基因4]。在非洲,关于IRDs遗传学的研究活动普遍较少。即使在南非和北非有一些研究活动被注意到的地方,研究队列中纳入的非洲本土黑人也很少。迫切需要开展关于IRDs的基因研究,尤其是在东非、中非和西非。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fb8/9964248/f4b02184290f/jpm-13-00239-g001.jpg

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