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一种新的香石竹类小病毒样RNA(CarSV-1)的基因组序列。

Genome Sequence of a New Carnation Small Viroid-Like RNA, CarSV-1.

作者信息

Breit Timo M, de Leeuw Wim C, van Olst Marina, Ensink Wim A, van Leeuwen Selina, Dekker Rob J

机构信息

RNA Biology & Applied Bioinformatics Research Group, Swammerdam Institute for Life Sciences, Faculty of Science, University of Amsterdam, Amsterdam, The Netherlands.

出版信息

Microbiol Resour Announc. 2023 Mar 16;12(3):e0121922. doi: 10.1128/mra.01219-22. Epub 2023 Feb 22.

Abstract

Here, we report the genome sequence of a new circular viroid-like RNA (CarSV-1) derived from Dianthus caryophyllus (carnation) leaves. The CarSV-1 genome has notable sequence similarity (62%) to the well-studied CarSV viroid-like RNA and comprises the complete hammerhead consensus sequences involved in self-cleavage. CarSV-1 co-occurs with carnation viruses, such as CarMV.

摘要

在此,我们报告了一种源自香石竹叶的新型环状类病毒RNA(CarSV-1)的基因组序列。CarSV-1基因组与经过充分研究的类病毒RNA CarSV具有显著的序列相似性(62%),并包含参与自我切割的完整锤头状共有序列。CarSV-1与香石竹病毒(如香石竹斑驳病毒)共同出现。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f879/10019309/b5308b490125/mra.01219-22-f001.jpg

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