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棉花中TPS基因的系统鉴定及其对淹水胁迫的响应特性

Systematic identification of TPS genes in Gossypium and their characteristics in response to flooding stress.

作者信息

Cui Aihua, Jin Yunqian, Li Yongqi, Nie Taili, Sun Liangqing

机构信息

Scientific Research Office, Economic Crop Institute of Jiangxi Province, Jiujiang, Jiangxi, China.

College of Agronomy, Henan University of Science and Technology, Luoyang, China.

出版信息

Front Plant Sci. 2023 Feb 8;14:1126884. doi: 10.3389/fpls.2023.1126884. eCollection 2023.

DOI:10.3389/fpls.2023.1126884
PMID:36844072
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9945120/
Abstract

Terpene synthases (TPS) is a key enzyme in the synthesis of plant terpenoids. Studies on TPSs have not been reported in and . 260 TPSs were identified in Gossypium, including 71 in , 75 in , 60 in , and 54 in . We systematically analyzed the TPS gene family of Gossypium from three aspects: gene structure, evolutionary process and gene function. (1) Gene structure: Based on the protein structure of two conserved domains (PF01397 and PF03936), the TPS gene family is divided into five clades: TPS -a, -b, -c, -e/f and -g. (2) Evolution: Whole genome duplication and segmental duplication are the main modes of TPS gene amplification. (3) Function: The abundance of cis-acting elements may reveal the functional diversity of TPSs in cotton. TPS gene has tissue specific expression in cotton. The hypomethylation of the exon of TPSs may help to enhance the adaptability of cotton to flooding stress. In conclusion, this study can broaden the understanding of structure-evolution-function of the TPS gene family, and provide reference for the mining and verification of new genes.

摘要

萜类合酶（TPS）是植物萜类化合物合成中的关键酶。关于TPS的研究在[具体物种1]和[具体物种2]中尚未见报道。在棉花中鉴定出260个TPS，其中[品种1]中有71个，[品种2]中有75个，[品种3]中有60个，[品种4]中有54个。我们从基因结构、进化过程和基因功能三个方面对棉花的TPS基因家族进行了系统分析。（1）基因结构：基于两个保守结构域（PF01397和PF03936）的蛋白质结构，TPS基因家族分为五个分支：TPS-a、-b、-c、-e/f和-g。（2）进化：全基因组复制和片段重复是TPS基因扩增的主要模式。（3）功能：顺式作用元件的丰度可能揭示了棉花中TPS的功能多样性。TPS基因在棉花中具有组织特异性表达。TPS外显子的低甲基化可能有助于增强棉花对淹水胁迫的适应性。总之，本研究可以拓宽对TPS基因家族结构-进化-功能的认识，并为新基因的挖掘和验证提供参考。

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4
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