Department of Plant and Environmental Sciences, The Institute of Life Sciences, The Hebrew University of Jerusalem, Edmond J. Safra Campus, Jerusalem 9190401, Israel.
Can J Microbiol. 2023 Apr 1;69(4):151-157. doi: 10.1139/cjm-2022-0266. Epub 2023 Feb 28.
The nomenclature of prokaryotes is regulated by the rules of the International Code of Nomenclature of Prokaryotes (ICNP) and is based on the Linnaean binomial system. The current rules of the Code only cover the nomenclature of the cultivated minority. Proposals to incorporate the uncultivated majority of bacteria and archaea under the rules of the Code were recently rejected by the International Committee on Systematics of Prokaryotes. The provisional rank of can be used to name uncultivated prokaryotes whose names cannot be validly published under the rules of the ICNP, but their names can now be validated under the Code of Nomenclature of Prokaryotes Described from Sequence Data (the SeqCode), which was recently established to cover the nomenclature of the uncultivated majority. Metagenomics, single-cell genomics, and high-throughput cultivation techniques have led to a flood of new organisms currently waiting to be named. Automated programs such as GAN and Protologger can assist researchers in naming and describing newly discovered prokaryotes, cultivated as well as uncultivated. However, Latin and Greek skills remain indispensable for proper quality control of names that must meet the standards set by the codes of nomenclature.
原核生物的命名法受《国际原核生物命名法规》(ICNP)的规则所规范,并基于林奈双名制系统。该法规的现行规则仅涵盖少数已培养的原核生物的命名法。将未经培养的大多数细菌和古菌纳入法规规则的提议最近被原核生物国际系统学委员会所拒绝。可以使用临时等级“未经培养的原核生物”来命名那些根据 ICNP 规则无法有效发表名称的未培养原核生物,但它们的名称现在可以根据最近建立的《基于序列数据描述的原核生物命名法规》(SeqCode)进行验证,该法规涵盖了未培养的大多数生物的命名法。宏基因组学、单细胞基因组学和高通量培养技术导致大量新的生物体目前正在等待命名。GAN 和 Protologger 等自动化程序可以帮助研究人员对新发现的原核生物进行命名和描述,无论是已培养的还是未培养的。然而,拉丁语和希腊语技能对于满足命名法规标准的名称的质量控制仍然是不可或缺的。