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一种基于高分辨率熔解曲线分析(HRM)的区域适应性技术,用于在中国山东省筛查伴有高胱氨酸尿症的甲基丙二酸血症的MMACHC基因携带者。

A regionally adapted HRM-based technique to screen MMACHC carriers for methylmalonic acidemia with homocystinuria in Shandong Province, China.

作者信息

Yang Haining, Li Mian, Zou Liang, Zou Hui, Zhao Yan, Cui Yazhou, Han Jinxiang

机构信息

Biomedical Sciences College & Shandong Medicinal Biotechnology Centre, Shandong First Medical University & Shandong Academy of Medical Sciences, Ji'nan, Shandong, China.

NHC Key Laboratory of Biotechnology Drugs (Shandong Academy of Medical Sciences), Ji'nan, Shandong, China.

出版信息

Intractable Rare Dis Res. 2023 Feb;12(1):29-34. doi: 10.5582/irdr.2023.01016.

Abstract

Methylmalonic acidemia with homocystinuria (MMA-cblC) is an autosomal recessive genetic disorder of organic acid metabolism. Shandong, a northern province of China, has a significantly high incidence of about 1/4,000, suggesting a high carrying rate among the local population. The current study established a PCR technique involving high-resolution melting (HRM) to screen for carriers based on hotspot mutation analysis to further develop a preventive strategy to reduce the local incidence of this rare disease. Whole-exome sequencing of 22 families with MMA-cblC and a comprehensive literature review were used to identify MMACHC hotspot mutations in Shandong Province. Subsequently, a PCR-HRM assay based on the selected mutations was established and optimized for large-scale hotspot mutation screening. The accuracy and efficiency of the screening technique was validated using samples from 69 individuals with MMA-cblC and 1,000 healthy volunteers. Six hotspot mutations in the MMACHC gene (c.609G>A, c.658_660delAAG, c.80A>G, c.217C>T, c.567dupT and c.482G>A), which account for 74% of the alleles associated with MMA-cblC, were used to establish a screening technique. The established PCR-HRM assay detected 88 MMACHC mutation alleles in a validation study with 100% accuracy. In the general population in Shandong, the carrying rate of 6 MMACHC hotspot mutations was 3.4%. In conclusion, the 6 hotspots identified cover the majority of the MMACHC mutation spectrum, and the Shandong population has a particularly high carrying rate of MMACHC mutations. The PCR-HRM assay is highly accurate, cost-effective, and easy to use, making it an ideal choice for mass carrier screening.

摘要

伴高胱氨酸尿症的甲基丙二酸血症(MMA-cblC)是一种常染色体隐性遗传的有机酸代谢紊乱疾病。中国北方省份山东的发病率显著较高,约为1/4000,这表明当地人群的携带率较高。本研究建立了一种基于高分辨率熔解曲线分析(HRM)的聚合酶链反应(PCR)技术,用于通过热点突变分析筛查携带者,以进一步制定预防策略,降低这种罕见疾病在当地的发病率。对22个患有MMA-cblC的家庭进行全外显子组测序,并进行全面的文献综述,以确定山东省MMACHC基因的热点突变。随后,基于选定的突变建立并优化了PCR-HRM检测方法,用于大规模热点突变筛查。使用69例MMA-cblC患者和1000名健康志愿者的样本验证了该筛查技术的准确性和效率。利用MMACHC基因中的6个热点突变(c.609G>A、c.658_660delAAG、c.80A>G、c.217C>T、c.567dupT和c.482G>A)建立了一种筛查技术,这些突变占与MMA-cblC相关等位基因的74%。在一项验证研究中,所建立的PCR-HRM检测方法以100%的准确率检测到88个MMACHC突变等位基因。在山东普通人群中,6个MMACHC热点突变的携带率为3.4%。总之,所确定的6个热点覆盖了MMACHC突变谱的大部分,山东人群中MMACHC突变的携带率特别高。PCR-HRM检测方法具有高度准确性、成本效益高且易于使用,是大规模携带者筛查的理想选择。

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Commentary: Expanded carrier screening: how much is too much?评论:扩大携带者筛查:多少才算过度?
Genet Med. 2019 Sep;21(9):1927-1930. doi: 10.1038/s41436-019-0514-1. Epub 2019 Apr 11.
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Methylmalonic acidemia: Current status and research priorities.甲基丙二酸血症:现状与研究重点
Intractable Rare Dis Res. 2018 May;7(2):73-78. doi: 10.5582/irdr.2018.01026.

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