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全结肠内容物评估:结肠测量应用

End to End Colonic Content Assessment: ColonMetry Application.

作者信息

Orellana Bernat, Monclús Eva, Navazo Isabel, Bendezú Álvaro, Malagelada Carolina, Azpiroz Fernando

机构信息

Visualization, Virtual Reality and Graphics Interaction Research Group, UPC-BarcelonaTech, 08034 Barcelona, Spain.

Digestive Department, University Hospital General de Catalunya, 08190 Barcelona, Spain.

出版信息

Diagnostics (Basel). 2023 Feb 28;13(5):910. doi: 10.3390/diagnostics13050910.

DOI:10.3390/diagnostics13050910
PMID:36900054
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10000726/
Abstract

The analysis of colonic contents is a valuable tool for the gastroenterologist and has multiple applications in clinical routine. When considering magnetic resonance imaging (MRI) modalities, T2 weighted images are capable of segmenting the colonic lumen, whereas fecal and gas contents can only be distinguished in T1 weighted images. In this paper, we present an end-to-end quasi-automatic framework that comprises all the steps needed to accurately segment the colon in T2 and T1 images and to extract colonic content and morphology data to provide the quantification of colonic content and morphology data. As a consequence, physicians have gained new insights into the effects of diets and the mechanisms of abdominal distension.

摘要

结肠内容物分析对胃肠病学家来说是一项有价值的工具,在临床常规中有多种应用。在考虑磁共振成像(MRI)模式时,T2加权图像能够分割结肠腔,而粪便和气体内容物只能在T1加权图像中区分。在本文中,我们提出了一个端到端的准自动框架,该框架包含在T2和T1图像中准确分割结肠以及提取结肠内容物和形态数据所需的所有步骤,以提供结肠内容物和形态数据的量化。因此,医生对饮食的影响和腹胀的机制有了新的认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/6971f169d9ad/diagnostics-13-00910-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/7bcda81301ad/diagnostics-13-00910-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/f18c8f85f181/diagnostics-13-00910-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/fc53ad06115b/diagnostics-13-00910-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/620820b0351b/diagnostics-13-00910-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/7812c7b10d8a/diagnostics-13-00910-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/6971f169d9ad/diagnostics-13-00910-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/7bcda81301ad/diagnostics-13-00910-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/f18c8f85f181/diagnostics-13-00910-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/fc53ad06115b/diagnostics-13-00910-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/620820b0351b/diagnostics-13-00910-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/7812c7b10d8a/diagnostics-13-00910-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5de/10000726/6971f169d9ad/diagnostics-13-00910-g006.jpg

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1
End to End Colonic Content Assessment: ColonMetry Application.全结肠内容物评估:结肠测量应用
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2
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J Magn Reson Imaging. 2019 Sep;50(3):733-745. doi: 10.1002/jmri.26628. Epub 2019 Jan 4.
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A scalable approach to T2-MRI colon segmentation.一种用于 T2-MRI 结肠分割的可扩展方法。
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Fetal MRI of urine and meconium by gestational age for the diagnosis of genitourinary and gastrointestinal abnormalities.按孕周进行胎儿尿液和胎粪的磁共振成像以诊断泌尿生殖系统和胃肠道异常。
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本文引用的文献

1
Differential Effects of Western and Mediterranean-Type Diets on Gut Microbiota: A Metagenomics and Metabolomics Approach.西方饮食与地中海饮食对肠道微生物群的差异影响:宏基因组学和代谢组学方法。
Nutrients. 2021 Jul 30;13(8):2638. doi: 10.3390/nu13082638.
2
Motor dysfunction of the gut in cystic fibrosis.囊性纤维化中的肠道运动功能障碍。
Neurogastroenterol Motil. 2020 Sep;32(9):e13883. doi: 10.1111/nmo.13883. Epub 2020 May 31.
3
A scalable approach to T2-MRI colon segmentation.一种用于 T2-MRI 结肠分割的可扩展方法。
Med Image Anal. 2020 Jul;63:101697. doi: 10.1016/j.media.2020.101697. Epub 2020 Apr 13.
4
Colonic content: effect of diet, meals, and defecation.结肠内容物:饮食、进餐及排便的影响
Neurogastroenterol Motil. 2017 Feb;29(2). doi: 10.1111/nmo.12930. Epub 2016 Aug 21.
5
Colonic content in health and its relation to functional gut symptoms.健康状态下的结肠内容物及其与肠道功能症状的关系。
Neurogastroenterol Motil. 2016 Jun;28(6):849-54. doi: 10.1111/nmo.12782. Epub 2016 Feb 12.
6
Quantification and variability in colonic volume with a novel magnetic resonance imaging method.一种新型磁共振成像方法对结肠容积的量化及变异性研究
Neurogastroenterol Motil. 2015 Dec;27(12):1755-63. doi: 10.1111/nmo.12673. Epub 2015 Sep 10.
7
A novel semi-automatic segmentation method for volumetric assessment of the colon based on magnetic resonance imaging.一种基于磁共振成像的用于结肠容积评估的新型半自动分割方法。
Abdom Imaging. 2015 Oct;40(7):2232-41. doi: 10.1007/s00261-015-0475-z.
8
Fasting and postprandial volumes of the undisturbed colon: normal values and changes in diarrhea-predominant irritable bowel syndrome measured using serial MRI.禁食和餐后未受干扰的结肠容量:使用系列 MRI 测量的以腹泻为主的肠易激综合征的正常值和变化。
Neurogastroenterol Motil. 2014 Jan;26(1):124-30. doi: 10.1111/nmo.12243. Epub 2013 Oct 17.
9
Mechanisms of abdominal distension in severe intestinal dysmotility: abdomino-thoracic response to gut retention.严重肠道动力障碍性腹胀的机制:腹部-胸部对肠道潴留的反应。
Neurogastroenterol Motil. 2013 Jun;25(6):e389-94. doi: 10.1111/nmo.12128. Epub 2013 Apr 22.
10
Abdominal distention results from caudo-ventral redistribution of contents.腹部膨胀是由内容物向尾腹侧重新分布引起的。
Gastroenterology. 2009 May;136(5):1544-51. doi: 10.1053/j.gastro.2009.01.067. Epub 2009 Feb 4.