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植物相关. 的分子检测与鉴定。

Molecular Detection and Identification of Plant-Associated .

机构信息

Department of Fermentation Technology and Microbiology, Faculty of Food Technology, University of Agriculture in Krakow, Balicka 122, 30-149 Kraków, Poland.

出版信息

Int J Mol Sci. 2023 Mar 2;24(5):4853. doi: 10.3390/ijms24054853.


DOI:10.3390/ijms24054853
PMID:36902287
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10003612/
Abstract

is a lactic acid bacterium often isolated from a wide variety of niches. Its ubiquity can be explained by a large, flexible genome that helps it adapt to different habitats. The consequence of this is great strain diversity, which may make their identification difficult. Accordingly, this review provides an overview of molecular techniques, both culture-dependent, and culture-independent, currently used to detect and identify . Some of the techniques described can also be applied to the analysis of other lactic acid bacteria.

摘要

是一种乳杆菌,通常从各种不同的生态位中分离出来。它的普遍性可以用一个大而灵活的基因组来解释,这个基因组帮助它适应不同的栖息地。其结果是巨大的菌株多样性,这可能使它们的鉴定变得困难。因此,本综述提供了目前用于检测和鉴定的分子技术的概述,包括依赖培养和不依赖培养的技术。所描述的一些技术也可以应用于其他乳酸菌的分析。

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引用本文的文献

[1]
Increase in Lactulose Content in a Hot-Alkaline-Based System through Fermentation with a Selected Lactic Acid Bacteria Strain Followed by the β-Galactosidase Catalysis Process.

Foods. 2023-11-29

本文引用的文献

[1]
Application of 16S rRNA virtual RFLP for the discrimination of some closely taxonomic-related lactobacilli species.

J Genet Eng Biotechnol. 2022-12-16

[2]
Benchmarking second and third-generation sequencing platforms for microbial metagenomics.

Sci Data. 2022-11-11

[3]
Screening of Strains from Sourdoughs for Biosuppression of pv. and in Table Grapes.

Microorganisms. 2022-10-22

[4]
Housekeeping gene gyrA, a potential molecular marker for Bacillus ecology study.

AMB Express. 2022-10-26

[5]
A Comprehensive Review of Performance of Next-Generation Sequencing Platforms.

Biomed Res Int. 2022

[6]
Comparison of Real-Time PCR and Droplet Digital PCR for the Quantitative Detection of Lactiplantibacillus plantarum subsp. plantarum.

Foods. 2022-5-3

[7]
Comparative genomic analysis of 455 Lactiplantibacillus plantarum isolates: Habitat-specific genomes shaped by frequent recombination.

Food Microbiol. 2022-6

[8]
Isolation, characterization and comparative genomics of potentially probiotic Lactiplantibacillus plantarum strains from Indian foods.

Sci Rep. 2022-2-4

[9]
Bacterial Community of Galchi-Baechu Kimchi Based on Culture-Dependent and - Independent Investigation and Selection of Starter Candidates.

J Microbiol Biotechnol. 2022-3-28

[10]
Shotgun sequence-based metataxonomic and predictive functional profiles of Pe poke, a naturally fermented soybean food of Myanmar.

PLoS One. 2021

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