Department of Biology, College of Science, University of Ha'il, Ha'il, Saudi Arabia.
Department of Biology, Faculty of Education, University of Gadarif, El-Gadarif, Sudan.
Cell Mol Biol (Noisy-le-grand). 2022 Sep 30;68(9):40-44. doi: 10.14715/cmb/2022.68.9.6.
This study aims at unraveling the bacterial biodiversity of Hail soil to establish a baseline study that contributes to harnessing these bacteria in applications that benefit human beings. We collected two groups of soil samples; one group of the models contained wheat roots, and the second group was free of roots. Bacteria were isolated from these soils, DNA was extracted, 16srRNA from different isolates was amplified and sequenced, and the phylogeny tree was analyzed. The taxonomic relationship indicated that the isolates obtained were belonging to Proteobacteria, Actinobacteria, and Firmicutes. The bacteria affiliated with Proteobacteria's phylum were Stenotrophomonas, Klebsiella, Azospirillum, Calidifontimicrobium. Firmicutes include Bacillus and Actinobacteria represented by Nocardioides. The genera Bacillus, Stenotrophomonas, Calidifontimicrobium, and Nocardioides were associated with wheat's rhizosphere while the others live free in the soil. The study concluded that Hail soil is a pool of bacteria affiliated to different phyla; they share genetic traits, tolerate harsh environmental conditions that lead them to play different crucial roles in the environment, and may contribute to all aspects of human life harnessed adequately. More studies using housekeeping genes, "omics" approaches, and studies examining these isolates' ability to withstand extreme environmental conditions are recommended to view more insights about these bacteria.
本研究旨在揭示海拉尔土壤中的细菌多样性,建立一个基准研究,以利用这些细菌在造福人类的应用中。我们收集了两组土壤样本;一组模型含有小麦根,另一组没有根。从这些土壤中分离出细菌,提取 DNA,扩增不同分离物的 16srRNA 并进行测序,然后分析系统发育树。分类关系表明,获得的分离物属于变形菌门、放线菌门和厚壁菌门。与变形菌门相关的细菌是寡养单胞菌属、克雷伯氏菌属、固氮螺菌属和钙微菌属。厚壁菌门包括芽孢杆菌属和以诺卡氏菌属为代表的放线菌。芽孢杆菌属、寡养单胞菌属、钙微菌属和诺卡氏菌属与小麦根际有关,而其他细菌则自由生活在土壤中。研究得出结论,海拉尔土壤是一个拥有不同门属细菌的聚集地;它们具有遗传特征,能够耐受恶劣的环境条件,这使它们在环境中发挥不同的关键作用,并可能充分利用人类生活的各个方面。建议使用看家基因、“组学”方法以及研究这些分离物在极端环境条件下的生存能力的更多研究,以更深入地了解这些细菌。