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对……中异烟肼和链霉素耐药相关突变的分析

analyses of isoniazid and streptomycin resistance-associated mutations in .

作者信息

Dasoondi Rushikesh Singh, Blundell Tom L, Pandurangan Arun Prasad

机构信息

Department of Biochemistry, University of Cambridge, United Kingdom.

出版信息

Comput Struct Biotechnol J. 2023 Feb 21;21:1874-1884. doi: 10.1016/j.csbj.2023.02.035. eCollection 2023.

Abstract

Multi-drug resistant tuberculosis is categorised by the World Health Organisation (WHO) as a public health crisis. techniques were used to probe the structural basis of resistance to isoniazid and streptomycin. Isoniazid resistance-associated mutations in InhA were predicted to reduce the binding affinity of NADH to InhA, without affecting INH-NAD (competitive-inhibitor) binding. Perturbation of the mutated residues was predicted (with the AlloSigMA server) to modulate the free energy of allosteric modulation of key binding site residues F41, F149, Y158 and W222. These results suggest that allosteric modulation of the protein structure may be key to the mechanism by which isoniazid resistance-associated mutations act. Mutations in the methyltransferase glucose-inhibited division gene B (GidB) are associated with streptomycin resistance. Molecular docking was carried out to predict the structure of the GidB bound to its substrate (s-adenosyl methionine). The effects of streptomycin resistance-associated mutations in GidB on protein stability and substrate binding were predicted (using SDM and mCSM-lig). All GidB mutants were predicted to disfavour SAM binding.

摘要

耐多药结核病被世界卫生组织(WHO)列为公共卫生危机。采用多种技术探究对异烟肼和链霉素耐药的结构基础。预测InhA中与异烟肼耐药相关的突变会降低NADH与InhA的结合亲和力,而不影响INH-NAD(竞争性抑制剂)的结合。利用AlloSigMA服务器预测突变残基的扰动会调节关键结合位点残基F41、F149、Y158和W222的变构调节自由能。这些结果表明,蛋白质结构的变构调节可能是异烟肼耐药相关突变发挥作用机制的关键。甲基转移酶葡萄糖抑制分裂基因B(GidB)中的突变与链霉素耐药有关。进行分子对接以预测与底物(S-腺苷甲硫氨酸)结合的GidB的结构。利用SDM和mCSM-lig预测GidB中与链霉素耐药相关的突变对蛋白质稳定性和底物结合的影响。预测所有GidB突变体均不利于SAM结合。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a379/10006719/d43a45746ffb/ga1.jpg

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