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发现:一种对细胞周期蛋白依赖性激酶8-细胞周期蛋白C复合物具有选择性、持久性的小分子降解剂。

Discovery of : A Selective, Durable, and Small-Molecule Degrader of the CDK8-Cyclin C Complex.

作者信息

Wang Mingyu, Lin Rongkun, Li Jiacheng, Suo Yuying, Gao Jing, Liu Liping, Zhou Liyuan, Ni Yicheng, Yang Ziqun, Zheng Jie, Lin Jin, Zhou Hu, Luo Cheng, Lin Hua

机构信息

State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai 201203, China.

University of Chinese Academy of Sciences, Beijing 100049, China.

出版信息

J Med Chem. 2023 Apr 13;66(7):4932-4951. doi: 10.1021/acs.jmedchem.2c02045. Epub 2023 Mar 17.

Abstract

The CDK8-cyclin C complex is an important anti-tumor target, but unlike CDK8, cyclin C remains undruggable. Modulators regulating cyclin C activity directly are still under development. Here, a series of hydrophobic tagging-based degraders of the CDK8-cyclin C complex were designed, synthesized, and evaluated to identify the first dual degrader, , which induced selective and synchronous degradation of CDK8 and cyclin C. Proteomic and immunoblot studies exhibited that significantly degraded CDK8 without reducing CDK19 and did not degrade other cyclin proteins except cyclin C. Moreover, showed enhanced anti-proliferative effects over its parental molecule, , with potency increased by 5-fold in MDA-MB-468 cells. exhibited more pronounced effects on CDK8-cyclin C downstream signaling than , suppressing STAT1 phosphorylation more persistently. RNA-sequencing analysis revealed that inhibited E2F- and MYC-driven carcinogenic transcriptional programs. Overall, is the first-in-class degrader of cyclin C and would be useful for studying the unknown functions of cyclin C.

摘要

细胞周期蛋白依赖性激酶8(CDK8)-细胞周期蛋白C复合物是一个重要的抗肿瘤靶点,但与CDK8不同,细胞周期蛋白C仍然难以成药。直接调节细胞周期蛋白C活性的调节剂仍在研发中。在此,设计、合成并评估了一系列基于疏水标签的CDK8-细胞周期蛋白C复合物降解剂,以鉴定首个双降解剂,其可诱导CDK8和细胞周期蛋白C的选择性同步降解。蛋白质组学和免疫印迹研究表明,该降解剂能显著降解CDK8而不降低CDK19,除细胞周期蛋白C外不降解其他细胞周期蛋白。此外,该降解剂比其母体分子表现出更强的抗增殖作用,在MDA-MB-468细胞中的效力提高了5倍。该降解剂对CDK8-细胞周期蛋白C下游信号的影响比母体分子更显著,能更持久地抑制信号转导和转录激活因子1(STAT1)磷酸化。RNA测序分析表明,该降解剂抑制了E2F和MYC驱动的致癌转录程序。总体而言,该降解剂是细胞周期蛋白C的首个同类降解剂,将有助于研究细胞周期蛋白C的未知功能。

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