Suppr超能文献

新种,从河边土壤中分离得到。

sp. nov., isolated from riverside soil.

作者信息

Kim Ju Hee, Ham You Ju, Kim Seung Bum

机构信息

Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, 99 Daehak-ro, Yuseong, Daejeon 34134, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2023 Mar;73(3). doi: 10.1099/ijsem.0.005755.

Abstract

An actinobacterial strain designated MMS20-HV4-12, displaying a high hydrolytic potential for various substrates, was isolated from a riverside soil sample and characterized by polyphasic taxonomic analysis. Growth occurred at 10-37 °C (optimum, 30°C), with NaCl concentrations of 0-4 % (optimum, 0 %) and at pH 7-9 (optimum, pH 8). MMS20-HV4-12 was catalase-positive, oxidase-negative, rod-shaped and formed creamy white-coloured colonies. Based on the results of 16S rRNA gene sequence analysis, MMS20-HV4-12 was found to be mostly related to the type strains of (98.3 % sequence similarity), (98.1 %) and (98.0 %). MMS20-HV4-12 showed optimal growth on Reaoner's 2A agar, forming white-coloured colonies. The diagnostic polar lipid profile consisted of diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol, the major fatty acids were iso-C, C ω8 and 10-methyl-C, the major isoprenoid quinone was MK-8(H), the diagnostic cell-wall sugar was galactose, and the cell-wall diamino acid was ll-diaminopimelic acid. The genome of MMS20-HV4-12 was 4.47 Mbp in size with a G+C content of 72.9 mol%. The genome based analysis indicated low relatedness between MMS20-HV4-12 and all compared species of , as the highest digital DNA-DNA hybridization and the orthologous average nucleotide identity values were 26.8 and 83.8% respectively. Based on genotypic, phenotypic and phylogenomic characterization, MMS20-HV4-12 evidently represents a novel species of genus , for which the name sp. nov. (type strain=MMS20-HV4-12=KCTC 49651=LMG 32360) is proposed.

摘要

从河边土壤样本中分离出一株放线菌菌株,命名为MMS20-HV4-12,该菌株对多种底物具有较高的水解潜力,并通过多相分类分析进行了表征。其生长温度为10-37°C(最适温度为30°C),NaCl浓度为0-4%(最适浓度为0%),pH值为7-9(最适pH值为8)。MMS20-HV4-12过氧化氢酶阳性,氧化酶阴性,呈杆状,形成乳白色菌落。基于16S rRNA基因序列分析结果,发现MMS20-HV4-12与(序列相似性为98.3%)、(98.1%)和(98.0%)的模式菌株关系最为密切。MMS20-HV4-12在Reaoner's 2A琼脂上生长最佳,形成白色菌落。诊断性极性脂质谱由二磷脂酰甘油、磷脂酰甘油和磷脂酰肌醇组成,主要脂肪酸为异-C、C ω8和10-甲基-C,主要类异戊二烯醌为MK-8(H),诊断性细胞壁糖为半乳糖,细胞壁二氨基酸为ll-二氨基庚二酸。MMS20-HV4-12的基因组大小为4.47 Mbp,G+C含量为72.9 mol%。基于基因组的分析表明,MMS20-HV4-12与所有已比较的属物种之间的相关性较低,最高的数字DNA-DNA杂交和直系同源平均核苷酸同一性值分别为26.8%和83.8%。基于基因型、表型和系统基因组学特征,MMS20-HV4-12显然代表了一个新的属物种,为此提出了新的名称 sp. nov.(模式菌株 = MMS20-HV4-12 = KCTC 49651 = LMG 32360)。

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验