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含鸟嘌呤N-硫代烷基连接基的DNA和RNA片段的制备。

Preparation of DNA and RNA Fragments Containing Guanine N -Thioalkyl Tethers.

作者信息

Hou Xiaorong, Wang Gang, Gaffney Barbara L, Jones Roger A

机构信息

Rutgers, The State University of New Jersey, Piscataway, New Jersey.

出版信息

Curr Protoc. 2023 Mar;3(3):e710. doi: 10.1002/cpz1.710.

DOI:10.1002/cpz1.710
PMID:36943108
Abstract

This article describes procedures for preparation of deoxyguanosine and guanosine derivatives in which the guanine N contains a thiopropyl tether, protected as a tert-butyl disulfide. After incorporation into a DNA or RNA fragment, this tether allows site-specific cross-linking to a thiol of a protein or another nucleic acid. © 2023 The Authors. Current Protocols published by Wiley Periodicals LLC. Basic Protocol 1: Preparation of diisopropyl-1-(tert-butylthio)-1,2-hydrazinedicarboxylate (4) Basic Protocol 2: Preparation of the 2'-deoxyguanosine N -propyl-tert-butyl disulfide phosphoramidite (12) Basic Protocol 3: Preparation of the guanosine N -propyl-tert-butyl disulfide phosphoramidite (20) Basic Protocol 4: Preparation of DNA fragments containing N -propyl-tert-butyl disulfide guanine Alternate Protocol: Preparation of RNA fragments containing N -propyl-tert-butyl disulfide guanine Basic Protocol 5: Conversion of N -propyl-tert-butyl disulfide to the free thiol, disulfide 5-thio-2-nitrobenzoic acid disulfide, or ethylamine disulfide.

摘要

本文介绍了脱氧鸟苷和鸟苷衍生物的制备方法,其中鸟嘌呤N含有一个硫代丙基连接基,以叔丁基二硫化物的形式进行保护。将其掺入DNA或RNA片段后,该连接基可实现与蛋白质或另一种核酸的硫醇进行位点特异性交联。© 2023作者。由Wiley Periodicals LLC出版的《当前实验方案》。基本方案1:二异丙基-1-(叔丁基硫代)-1,2-肼二羧酸酯(4)的制备 基本方案2:2'-脱氧鸟苷N-丙基-叔丁基二硫化物亚磷酰胺(12)的制备 基本方案3:鸟苷N-丙基-叔丁基二硫化物亚磷酰胺(20)的制备 基本方案4:含有N-丙基-叔丁基二硫化物鸟嘌呤的DNA片段的制备 替代方案:含有N-丙基-叔丁基二硫化物鸟嘌呤的RNA片段的制备 基本方案5:将N-丙基-叔丁基二硫化物转化为游离硫醇、二硫化物5-硫代-2-硝基苯甲酸二硫化物或乙胺二硫化物。

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