Department of Radiation Oncology, Shanghai Jiao Tong University Medical School Affiliated Ruijin Hospital, Shanghai, China.
Department of Radiation Oncology, Affiliated Tumor Hospital of Nantong University, Nantong, Jiangsu, China.
Front Immunol. 2023 Mar 7;14:1139797. doi: 10.3389/fimmu.2023.1139797. eCollection 2023.
Recent studies have shown that ovarian aging is strongly associated with the risk of breast cancer, however, its prognostic impact on breast cancer is not yet fully understood. In this study, we performed a multicohort genetic analysis to explore its prognostic value and biological features in breast cancer.
The gene expression and clinicopathological data of 3366 patients from the The Cancer Genome Atlas (TCGA) cohort, the Molecular Taxonomy of Breast Cancer International Consortium (METABRIC) cohort and the GSE86166 cohort were analyzed. A total of 290 ovarian aging-related genes (OARGs) were included in the establishment of the prognostic model. Furthermore, functional mechanisms analysis, drug sensitivity, and immune cell infiltration were investigated using bioinformatic methods.
An eight OARG-based signature was established and validated using independent cohorts. Two risk subgroups of patients with distinct survival outcomes were identified by the OARG-based signature. A nomogram with good predictive performance was developed by integrating the OARG risk score with clinicopathological factors. Moreover, the OARG-based signature was correlated with DNA damage repair, immune cell signaling pathways, and immunomodulatory functions. The patients in the low-risk subgroup were found to be sensitive to traditional chemotherapeutic, endocrine, and targeted agents (doxorubicin, tamoxifen, lapatinib, etc.) and some novel targeted drugs (sunitinib, pazopanib, etc.). Moreover, patients in the low-risk subgroup may be more susceptible to immune escape and therefore respond less effectively to immunotherapy.
In this study, we proposed a comprehensive analytical method for breast cancer assessment based on OARG expression patterns, which could precisely predict clinical outcomes and drug sensitivity of breast cancer patients.
最近的研究表明,卵巢衰老与乳腺癌的风险密切相关,但它对乳腺癌的预后影响尚不完全清楚。在这项研究中,我们进行了多队列遗传分析,以探讨其在乳腺癌中的预后价值和生物学特征。
分析了来自癌症基因组图谱(TCGA)队列、乳腺癌国际联合会分子分类(METABRIC)队列和 GSE86166 队列的 3366 名患者的基因表达和临床病理数据。共纳入 290 个卵巢衰老相关基因(OARGs)建立预后模型。此外,还使用生物信息学方法进行了功能机制分析、药物敏感性和免疫细胞浸润分析。
利用独立队列建立和验证了一个基于 8 个 OARG 的标志物。该 OARG 标志物可将患者分为具有明显生存结局的两个风险亚组。通过将 OARG 风险评分与临床病理因素相结合,构建了一个具有良好预测性能的列线图。此外,OARG 标志物与 DNA 损伤修复、免疫细胞信号通路和免疫调节功能相关。低风险亚组的患者对传统化疗药物、内分泌药物和靶向药物(多柔比星、他莫昔芬、拉帕替尼等)和一些新型靶向药物(舒尼替尼、帕唑帕尼等)敏感。此外,低风险亚组的患者可能更容易发生免疫逃逸,因此对免疫治疗的反应效果较差。
在这项研究中,我们提出了一种基于 OARG 表达模式的乳腺癌综合评估分析方法,该方法可准确预测乳腺癌患者的临床结局和药物敏感性。