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GOLPH3 调节与人类子宫内膜基质细胞子宫内膜蜕膜化相关的转录因子的表达和可变剪接。

GOLPH3 modulates expression and alternative splicing of transcription factors associated with endometrial decidualization in human endometrial stromal cells.

机构信息

Reproductive Medicine Center, Fujian Maternity and Child Health Hospital College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, Fujian, China.

Medical Research Center, Fujian Maternity and Child Health Hospital College of Clinical Medicine for Obstetrics & Gynecology and Pediatrics, Fujian Medical University, Fuzhou, Fujian, China.

出版信息

PeerJ. 2023 Mar 20;11:e15048. doi: 10.7717/peerj.15048. eCollection 2023.

Abstract

Endometrial decidualization is a decidual tissue formed by the proliferation and re-differentiation of endometrial stroma stimulated by decidualization inducing factors. It is very important for the proper maintenance of pregnancy. Previous studies speculated that Golgi phosphoprotein 3 (GOLPH3) may have a regulatory role in the process of endometrial decidualization, while the specific molecular mechanisms of GOLPH3 is unclear. In this part, GOLPH3 was silenced in human endometrial stromal cells (hESCs), and the transcriptome data (RNA-seq) by GOLPH3 knockdown (siGOLPH3) was obtained by high-throughput sequencing technology so as to analyze the potential targets of GOLPH3 at expression and alternative splicing levels in hESCs. Through bioinformatics analysis, we found that siGOLPH3 can significantly affect the overall transcriptional level of hESCs. A total of 6,025 differentially expressed genes (DEGs) and 4,131 differentially alternative splicing events (DASEs) were identified. Through functional cluster analysis of these DEGs and genes where differential alternative splicing events are located, it is found that they are enriched in the PI3K/Akt signaling pathway, RNA splicing and processing, transcription factors and other pathways related to endometrial decidualization and important biological processes, indicating the important biological function of GOLPH3. At the same time, we focused on the analysis of the transcription factors regulated by GOLPH3, including gene expression regulation and the regulation of variable splicing. We found that GOLPH3can regulate the expression of transcription factors such as LD1, FOSL2, GATA2, CSDC2 and CREB3L1. At the same time, it affects the variable splicing mode of FOXM1 and TCF3. The function of these transcription factors is directly related to decidualization of endometrium. Therefore, we infer that GOLPH3 may participate in endometrial de membrane by regulating expression and alternative splicing levels of transcription factors. We further identified the role of GOLPH3 in the transcriptional mechanism. At the same time, it also expands the function mode of GOLPH3 protein molecule, and provides a theoretical basis for downstream targeted drug research and development and clinical application.

摘要

子宫内膜蜕膜化是由蜕膜化诱导因子刺激子宫内膜基质增殖和再分化形成的蜕膜组织。它对妊娠的正常维持非常重要。先前的研究推测高尔基磷蛋白 3(GOLPH3)可能在子宫内膜蜕膜化过程中具有调节作用,而 GOLPH3 的具体分子机制尚不清楚。在这一部分,沉默了人子宫内膜基质细胞(hESCs)中的 GOLPH3,并通过高通量测序技术获得了 GOLPH3 敲低(siGOLPH3)的转录组数据(RNA-seq),以分析 hESCs 中 GOLPH3 在表达和选择性剪接水平上的潜在靶标。通过生物信息学分析,我们发现 siGOLPH3 可以显著影响 hESCs 的整体转录水平。共鉴定出 6025 个差异表达基因(DEGs)和 4131 个差异选择性剪接事件(DASEs)。通过对这些 DEGs 和差异选择性剪接事件所在基因的功能聚类分析,发现它们富集在 PI3K/Akt 信号通路、RNA 剪接和加工、转录因子等与子宫内膜蜕膜化和重要生物学过程相关的途径中,表明 GOLPH3 具有重要的生物学功能。同时,我们重点分析了受 GOLPH3 调节的转录因子,包括基因表达调控和可变剪接调控。我们发现 GOLPH3 可以调节 LD1、FOSL2、GATA2、CSDC2 和 CREB3L1 等转录因子的表达。同时,它影响 FOXM1 和 TCF3 的可变剪接模式。这些转录因子的功能与子宫内膜蜕膜化直接相关。因此,我们推断 GOLPH3 可能通过调节转录因子的表达和选择性剪接水平参与子宫内膜蜕膜化。我们进一步确定了 GOLPH3 在转录机制中的作用。同时,它还扩展了 GOLPH3 蛋白分子的功能模式,为下游靶向药物研究与开发和临床应用提供了理论依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd4d/10035422/5771cae470fe/peerj-11-15048-g001.jpg

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