National High-Throughput Crystallization Center, Hauptman-Woodward Medical Research Institute.
National High-Throughput Crystallization Center, Hauptman-Woodward Medical Research Institute; Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, The State University of New York;
J Vis Exp. 2023 Mar 10(193). doi: 10.3791/65211.
X-ray crystallography is the most commonly employed technique to discern macromolecular structures, but the crucial step of crystallizing a protein into an ordered lattice amenable to diffraction remains challenging. The crystallization of biomolecules is largely experimentally defined, and this process can be labor-intensive and prohibitive to researchers at resource-limited institutions. At the National High-Throughput Crystallization (HTX) Center, highly reproducible methods have been implemented to facilitate crystal growth, including an automated high-throughput 1,536-well microbatch-under-oil plate setup designed to sample a wide breadth of crystallization parameters. Plates are monitored using state-of-the-art imaging modalities over the course of 6 weeks to provide insight into crystal growth, as well as to accurately distinguish valuable crystal hits. Furthermore, the implementation of a trained artificial intelligence scoring algorithm for identifying crystal hits, coupled with an open-source, user-friendly interface for viewing experimental images, streamlines the process of analyzing crystal growth images. Here, the key procedures and instrumentation are described for the preparation of the cocktails and crystallization plates, imaging the plates, and identifying hits in a way that ensures reproducibility and increases the likelihood of successful crystallization.
X 射线晶体学是最常用于辨别大分子结构的技术,但将蛋白质结晶成适合衍射的有序晶格的关键步骤仍然具有挑战性。生物分子的结晶在很大程度上是通过实验定义的,这个过程可能很繁琐,而且对资源有限的机构的研究人员来说也是昂贵的。在国家高通量结晶(HTX)中心,实施了高度可重复的方法来促进晶体生长,包括设计用于采样广泛结晶参数的自动化高通量 1536 孔微批量油板设置。在 6 周的时间里,使用最先进的成像方式监测平板,以深入了解晶体生长情况,并准确区分有价值的晶体命中。此外,实施了经过训练的人工智能评分算法来识别晶体命中,再加上用于查看实验图像的开源、用户友好的界面,简化了分析晶体生长图像的过程。在这里,描述了用于制备鸡尾酒和结晶板、对平板成像以及以确保重现性和提高结晶成功率的方式识别命中的关键步骤和仪器。