Gao D L, Dong R F, Liu W F, Gong L H, Xu H R, Niu X H, Ding Y
Deptartment of Pathology, Beijing Jishuitan Hospital, the Fourth Medical College of Peking University, Beijing 100035, China.
Deptartment of Orthopaedic Oncology Surgery, Beijing Jishuitan Hospital, the Fourth Medical College of Peking University, Beijing 100035, China.
Zhonghua Bing Li Xue Za Zhi. 2023 Apr 8;52(4):370-375. doi: 10.3760/cma.j.cn112151-20221030-00902.
To investigate the distribution and characteristics of gene mutations in osteosarcoma, and to analyze the frequency and types of detectable mutations, and to identify potential targets for individualized treatment of osteosarcoma. The fresh tissue or paraffin-embedded tissue samples of 64 cases of osteosarcoma that were surgically resected or biopsied and then subject to next generation sequencing, were collected from Beijing Jishuitan Hospital, China from November 2018 to December 2021. The tumor DNA was extracted to detect the somatic and germline mutations using targeted sequencing technology. Among the 64 patients, 41 were males and 23 were females. The patient age ranged from 6 to 65 years with a median age of 17 years, including 36 children (under 18 years old) and 28 adults. There were 52 cases of conventional osteosarcoma, 3 cases of telangiectatic osteosarcoma, 7 cases of secondary osteosarcoma, and 2 cases of parosteosarcoma. The detection rate of gene mutations was overall 84.4% (54/64). There were 324 variations in 180 mutated genes, including 125 genes with copy number variations, 109 single nucleotide variants, 83 insertions or deletions, and 7 gene fusions. The most common mutated genes were TP53, VEGFA, CCND3, ATRX, MYC, RB1, PTEN, GLI1, CDK4 and PTPRD. Among them, TP53 had the highest mutation rate (21/64, 32.8%), single nucleotide variant was the main mutation type (14/23, 60.9%), and 2 cases carried the TP53 germline mutation. VEGFA and CCND3 showed copy number amplification simultaneously in 7 cases. The high-frequency mutation of TP53 suggests that it plays an important role in the pathogenesis and development of osteosarcoma. VEGFA, CCND3 and ATRX are mutated genes in osteosarcoma and worthy of further studies. Combination of pathologic diagnosis and next generation sequencing with clinical practice can guide individualized treatment for patients with refractory, recurrent and metastatic osteosarcoma.
探讨骨肉瘤基因突变的分布及特征,分析可检测到的突变频率和类型,确定骨肉瘤个体化治疗的潜在靶点。收集2018年11月至2021年12月在中国北京积水潭医院手术切除或活检后进行二代测序的64例骨肉瘤新鲜组织或石蜡包埋组织样本。提取肿瘤DNA,采用靶向测序技术检测体细胞和种系突变。64例患者中,男性41例,女性23例。患者年龄6至65岁,中位年龄17岁,其中儿童(18岁以下)36例,成人28例。传统型骨肉瘤52例,毛细血管扩张型骨肉瘤3例,继发性骨肉瘤7例,骨旁骨肉瘤2例。基因突变总体检出率为84.4%(54/64)。180个突变基因中有324个变异,包括125个拷贝数变异基因、109个单核苷酸变异、83个插入或缺失以及7个基因融合。最常见的突变基因是TP53、VEGFA、CCND3、ATRX、MYC、RB1、PTEN、GLI1、CDK4和PTPRD。其中,TP53突变率最高(21/64,32.8%),单核苷酸变异是主要突变类型(14/23,60.9%),2例携带TP53种系突变。7例VEGFA和CCND3同时出现拷贝数扩增。TP53的高频突变表明其在骨肉瘤的发病机制和发展中起重要作用。VEGFA、CCND3和ATRX是骨肉瘤中的突变基因,值得进一步研究。病理诊断、二代测序与临床实践相结合可指导难治性、复发性和转移性骨肉瘤患者的个体化治疗。