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阐明 DNA-艾曲波帕结合:电化学、光谱和分子对接技术。

Elucidation of DNA-Eltrombopag Binding: Electrochemical, Spectroscopic and Molecular Docking Techniques.

机构信息

Department of Analytical Chemistry, Faculty of Pharmacy, Ankara University, Ankara 06560, Turkey.

Department of Chemistry, Shahid Bahonar University of Kerman, Kerman 7616914111, Iran.

出版信息

Biosensors (Basel). 2023 Feb 21;13(3):300. doi: 10.3390/bios13030300.

Abstract

Eltrombopag is a powerful adjuvant anticancer drug used in treating MS (myelodysplastic syndrome) and AML (acute myeloid leukemia) diseases. In this study, the interaction mechanism between eltrombopag and DNA was studied by voltammetry, spectroscopic techniques, and viscosity measurements. We developed a DNA-based biosensor and nano-biosensor using reduced graphene oxide-modified glassy carbon electrode to detect DNA-eltrombopag binding. The reduction of desoxyguanosine (dGuo) and desoxyadenosine (dAdo) oxidation signals in the presence of the drug demonstrated that a strong interaction could be established between the eltrombopag and dsDNA. The eltrombopag-DNA interaction was further investigated by UV absorption and fluorescence emission spectroscopy to gain more quantitative insight on binding. Viscosity measurements were utilized to characterize the binding mode of the drug. To shed light on the noncovalent interactions and binding mechanism of eltrombopag molecular docking and molecular dynamics (MD), simulations were performed. Through simultaneously carried out experimental and in silico studies, it was established that the eltrombopag binds onto the DNA via intercalation.

摘要

依洛尤单抗是一种强效的辅助抗癌药物,用于治疗骨髓增生异常综合征(MDS)和急性髓系白血病(AML)。在这项研究中,通过伏安法、光谱技术和粘度测量研究了依洛尤单抗与 DNA 的相互作用机制。我们使用还原氧化石墨烯修饰的玻碳电极开发了基于 DNA 的生物传感器和纳米生物传感器,以检测 DNA-依洛尤单抗的结合。在药物存在的情况下,脱氧鸟苷(dGuo)和脱氧腺苷(dAdo)氧化信号的减少表明,依洛尤单抗和 dsDNA 之间可以建立强烈的相互作用。通过紫外吸收和荧光发射光谱进一步研究了依洛尤单抗-DNA 的相互作用,以获得更多关于结合的定量见解。利用粘度测量来表征药物的结合模式。为了阐明依洛尤单抗分子对接和分子动力学(MD)模拟的非共价相互作用和结合机制,进行了模拟。通过同时进行的实验和计算研究,确定依洛尤单抗通过嵌入结合到 DNA 上。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6876/10046231/2bde9916831b/biosensors-13-00300-sch001.jpg

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