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基于结构的DCLK1突变对肿瘤发生功能影响的预测

Structure-Guided Prediction of the Functional Impact of DCLK1 Mutations on Tumorigenesis.

作者信息

Carli Annalisa L E, Hardy Joshua M, Hoblos Hanadi, Ernst Matthias, Lucet Isabelle S, Buchert Michael

机构信息

Cancer Inflammation Laboratory, Olivia Newton-John Cancer Research Institute, Heidelberg, VIC 3084, Australia.

School of Cancer Medicine, La Trobe University, Bundoora, VIC 3086, Australia.

出版信息

Biomedicines. 2023 Mar 22;11(3):990. doi: 10.3390/biomedicines11030990.

DOI:10.3390/biomedicines11030990
PMID:36979969
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10046695/
Abstract

Doublecortin-like kinase 1 (DCLK1) is a functional serine/threonine (S/T)-kinase and a member of the doublecortin family of proteins which are characterized by their ability to bind to microtubules (MTs). DCLK1 is a proposed cancer driver gene, and its upregulation is associated with poor overall survival in several solid cancer types. However, how DCLK1 associates with MTs and how its kinase function contributes to pro-tumorigenic processes is poorly understood. This review builds on structural models to propose not only the specific functions of the domains but also attempts to predict the impact of individual somatic missense mutations on DCLK1 functions. Somatic missense mutations in DCLK1 are most frequently located within the N-terminal MT binding region and likely impact on the ability of DCLK1 to bind to αβ-tubulin and to polymerize and stabilize MTs. Moreover, the MT binding affinity of DCLK1 is negatively regulated by its auto-phosphorylation, and therefore mutations that affect kinase activity are predicted to indirectly alter MT dynamics. The emerging picture portrays DCLK1 as an MT-associated protein whose interactions with tubulin heterodimers and MTs are tightly controlled processes which, when disrupted, may confer pro-tumorigenic properties.

摘要

双皮质素样激酶1(DCLK1)是一种功能性丝氨酸/苏氨酸(S/T)激酶,属于双皮质素蛋白家族成员,其特点是能够与微管(MT)结合。DCLK1被认为是一种癌症驱动基因,其上调与多种实体癌类型的总体生存率低有关。然而,人们对DCLK1如何与微管结合以及其激酶功能如何促进肿瘤发生过程知之甚少。本综述基于结构模型,不仅提出了各结构域的具体功能,还试图预测个别体细胞错义突变对DCLK1功能的影响。DCLK1中的体细胞错义突变最常位于N端微管结合区域,可能影响DCLK1与αβ-微管蛋白结合以及使微管聚合和稳定的能力。此外,DCLK1的微管结合亲和力受其自身磷酸化的负调控,因此预计影响激酶活性的突变会间接改变微管动力学。新出现的情况表明,DCLK1是一种与微管相关的蛋白,其与微管蛋白异二聚体和微管的相互作用是受到严格控制的过程,一旦被破坏,可能赋予促肿瘤特性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/ffc8e4c4c757/biomedicines-11-00990-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/10fa57068dc6/biomedicines-11-00990-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/ce1490a11df8/biomedicines-11-00990-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/05d834de8cf6/biomedicines-11-00990-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/ffc8e4c4c757/biomedicines-11-00990-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/10fa57068dc6/biomedicines-11-00990-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/ce1490a11df8/biomedicines-11-00990-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/05d834de8cf6/biomedicines-11-00990-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c16c/10046695/ffc8e4c4c757/biomedicines-11-00990-g005.jpg

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EMBO Mol Med. 2023 May 8;15(5):e17198. doi: 10.15252/emmm.202217198. Epub 2023 Mar 10.
2
Oncogenic functions and clinical significances of DCLK1 isoforms in colorectal cancer: a systematic review and meta-analysis.DCLK1 亚型在结直肠癌中的致癌功能及临床意义:一项系统综述和荟萃分析
Cancer Cell Int. 2022 Jun 18;22(1):217. doi: 10.1186/s12935-022-02632-9.
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Harmonizing model organism data in the Alliance of Genome Resources.
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Genetics. 2022 Apr 4;220(4). doi: 10.1093/genetics/iyac022.
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Lysate-based pipeline to characterize microtubule-associated proteins uncovers unique microtubule behaviours.基于裂解物的微管相关蛋白表征流程揭示了独特的微管行为。
Nat Cell Biol. 2022 Feb;24(2):253-267. doi: 10.1038/s41556-021-00825-4. Epub 2022 Jan 31.
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Inhibition of DCLK1 kinase reverses epithelial-mesenchymal transition and restores T-cell activity in pancreatic ductal adenocarcinoma.抑制双皮质素样激酶1(DCLK1)激酶可逆转胰腺导管腺癌中的上皮-间质转化并恢复T细胞活性。
Transl Oncol. 2022 Mar;17:101317. doi: 10.1016/j.tranon.2021.101317. Epub 2022 Jan 5.
6
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