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沙特原发性开角型青光眼患者中位于 (rs2472493)上游、 (rs7636836)和附近-基因(rs61275591)多态性缺失与原发性开角型青光眼无关。

Lack of Association of Polymorphism Located Upstream of (rs2472493), in (rs7636836), and Near - Genes (rs61275591) in Primary Open-Angle Glaucoma Patients of Saudi Origin.

机构信息

Department of Ophthalmology, College of Medicine, King Saud University, Riyadh 11411, Saudi Arabia.

Glaucoma Research Chair in Ophthalmology, College of Medicine, King Saud University, Riyadh 11411, Saudi Arabia.

出版信息

Genes (Basel). 2023 Mar 13;14(3):704. doi: 10.3390/genes14030704.

Abstract

Polymorphisms rs2472493 near , rs7636836 in , and rs61275591 near the genes were previously reported to exhibit genome-wide significance in primary open-angle glaucoma (POAG). Since these polymorphisms have not been investigated in the Arab population of Saudi Arabia, we examined their association with POAG in a Saudi cohort. Genotyping was performed in 152 POAG cases and 246 controls using Taqman real-time assays and their associations with POAG and clinical markers, such as intraocular pressure, cup/disc ratio, and the number of antiglaucoma medications, were tested by statistical methods. There was no association observed between POAG and the minor allele frequencies of rs2472493[G], rs7636836[T], or rs61275591[A]. None of the genetic models such as co-dominant, dominant, recessive, over-dominant, and log-additive demonstrated any genotype link. The Rs2472493 genotype showed a modest association ( = 0.044) with the number of antiglaucoma medications in the POAG group, but no significant genotype effect on post hoc analysis. In addition, a G-T allelic haplotype of rs2472493 () and rs7636836 () did show an over two-fold increased risk of POAG (odds ratio = 2.18), albeit non-significantly ( = 0.092). Similarly, no other allelic haplotype of the three variants showed any significant association with POAG. Our study did not replicate the genetic association of rs2472493 (), rs763683 (), and rs61275591 (-) in POAG and related clinical phenotypes, suggesting that these polymorphisms are not associated with POAG in a Saudi cohort of Arab ethnicity. However, large population-based multicenter studies are needed to validate these results.

摘要

先前的研究表明, 基因附近的 rs2472493 多态性、 基因内的 rs7636836 多态性和 基因附近的 rs61275591 多态性与原发性开角型青光眼(POAG)具有全基因组显著相关性。由于这些多态性尚未在沙特阿拉伯的阿拉伯人群中进行研究,我们在沙特队列中检查了它们与 POAG 的关联。使用 Taqman 实时分析对 152 例 POAG 病例和 246 例对照进行基因分型,并通过统计方法测试它们与 POAG 和临床标志物(如眼压、杯/盘比和抗青光眼药物数量)的关联。未观察到 POAG 与 rs2472493[G]、rs7636836[T]或 rs61275591[A]的次要等位基因频率之间存在关联。共显性、显性、隐性、过显性和对数相加等遗传模型均未显示任何基因型关联。rs2472493 基因型与 POAG 组抗青光眼药物数量之间存在适度关联( = 0.044),但在后验分析中没有显著的基因型效应。此外,rs2472493()和 rs7636836()的 G-T 等位基因单倍型显示 POAG 的风险增加了两倍以上(优势比=2.18),尽管无统计学意义( = 0.092)。同样,三个变体的其他等位基因单倍型与 POAG 均无显著关联。我们的研究未复制 rs2472493()、rs763683()和 rs61275591()在 POAG 和相关临床表型中的遗传关联,表明这些多态性与沙特阿拉伯阿拉伯人群的 POAG 无关。然而,需要进行基于人群的大型多中心研究来验证这些结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eac0/10048255/7f676f012170/genes-14-00704-g001.jpg

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