• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

采用集成的计算策略鉴定褐黄病治疗的潜在抑制剂。

Identification of Potential Inhibitors for the Treatment of Alkaptonuria Using an Integrated In Silico Computational Strategy.

机构信息

Department of Basic and Applied Chemistry, Faculty of Science and Technology, University of Central Punjab, Lahore 54590, Pakistan.

Department of Pharmaceutical Sciences, College of Pharmacy, Al Ain University, Al Ain P.O. Box 64141, United Arab Emirates.

出版信息

Molecules. 2023 Mar 14;28(6):2623. doi: 10.3390/molecules28062623.

DOI:10.3390/molecules28062623
PMID:36985595
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10058836/
Abstract

Alkaptonuria (AKU) is a rare genetic autosomal recessive disorder characterized by elevated serum levels of homogentisic acid (HGA). In this disease, tyrosine metabolism is interrupted because of the alterations in homogentisate dioxygenase (HGD) gene. The patient suffers from ochronosis, fractures, and tendon ruptures. To date, no medicine has been approved for the treatment of AKU. However, physiotherapy and strong painkillers are administered to help mitigate the condition. Recently, nitisinone, an FDA-approved drug for type 1 tyrosinemia, has been given to AKU patients in some countries and has shown encouraging results in reducing the disease progression. However, this drug is not the targeted treatment for AKU, and causes keratopathy. Therefore, the foremost aim of this study is the identification of potent and druggable inhibitors of AKU with no or minimal side effects by targeting 4-hydroxyphenylpyruvate dioxygenase. To achieve our goal, we have performed computational modelling using BioSolveIT suit. The library of ligands for molecular docking was acquired by fragment replacement of reference molecules by ReCore. Subsequently, the hits were screened on the basis of estimated affinities, and their pharmacokinetic properties were evaluated using SwissADME. Afterward, the interactions between target and ligands were investigated using Discovery Studio. Ultimately, compounds and were identified as potent inhibitors of 4-hydroxyphenylpyruvate dioxygenase.

摘要

尿黑酸尿症(AKU)是一种罕见的常染色体隐性遗传疾病,其特征是血清同型半胱氨酸(HGA)水平升高。在这种疾病中,由于同型半胱氨酸双加氧酶(HGD)基因的改变,酪氨酸代谢被中断。患者患有褐黄病、骨折和肌腱断裂。迄今为止,尚无药物被批准用于 AKU 的治疗。然而,物理疗法和强力止痛药被用于帮助减轻病情。最近,FDA 批准用于治疗 1 型酪氨酸血症的尼替西农已在一些国家用于 AKU 患者,并已显示出可降低疾病进展的可喜结果。然而,这种药物不是 AKU 的靶向治疗药物,会引起角膜病。因此,本研究的首要目标是通过靶向 4-羟基苯丙酮酸双加氧酶,确定具有强大和可成药的 AKU 抑制剂,且具有最小的副作用或无副作用。为了实现我们的目标,我们使用 BioSolveIT 套件进行了计算建模。分子对接的配体库是通过参考分子的片段替换由 ReCore 获得的。随后,根据估计的亲和力对命中物进行筛选,并使用 SwissADME 评估其药代动力学特性。之后,使用 Discovery Studio 研究了靶标和配体之间的相互作用。最终,化合物 和 被鉴定为 4-羟基苯丙酮酸双加氧酶的有效抑制剂。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/ce34f005fa15/molecules-28-02623-g013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/356d7d04f78e/molecules-28-02623-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/6cb7980385d2/molecules-28-02623-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/2276057513cb/molecules-28-02623-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/d155eff3d473/molecules-28-02623-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/f608eb3c7f54/molecules-28-02623-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/75133d87b458/molecules-28-02623-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/ef70019c08fb/molecules-28-02623-g007a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/c22f8ebb2a1d/molecules-28-02623-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/53cab66075ae/molecules-28-02623-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/76ce57d7717f/molecules-28-02623-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/5bdfff283b19/molecules-28-02623-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/eaa9d28922f5/molecules-28-02623-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/ce34f005fa15/molecules-28-02623-g013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/356d7d04f78e/molecules-28-02623-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/6cb7980385d2/molecules-28-02623-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/2276057513cb/molecules-28-02623-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/d155eff3d473/molecules-28-02623-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/f608eb3c7f54/molecules-28-02623-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/75133d87b458/molecules-28-02623-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/ef70019c08fb/molecules-28-02623-g007a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/c22f8ebb2a1d/molecules-28-02623-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/53cab66075ae/molecules-28-02623-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/76ce57d7717f/molecules-28-02623-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/5bdfff283b19/molecules-28-02623-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/eaa9d28922f5/molecules-28-02623-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8cf/10058836/ce34f005fa15/molecules-28-02623-g013.jpg

相似文献

1
Identification of Potential Inhibitors for the Treatment of Alkaptonuria Using an Integrated In Silico Computational Strategy.采用集成的计算策略鉴定褐黄病治疗的潜在抑制剂。
Molecules. 2023 Mar 14;28(6):2623. doi: 10.3390/molecules28062623.
2
Inhibition of para-Hydroxyphenylpyruvate Dioxygenase by Analogues of the Herbicide Nitisinone As a Strategy to Decrease Homogentisic Acid Levels, the Causative Agent of Alkaptonuria.除草剂尼替西农类似物对对羟基苯丙酮酸双加氧酶的抑制作用:作为降低黑尿症致病因子尿黑酸水平的一种策略
ChemMedChem. 2016 Apr 5;11(7):674-8. doi: 10.1002/cmdc.201500578. Epub 2016 Mar 7.
3
Nitisinone arrests ochronosis and decreases rate of progression of Alkaptonuria: Evaluation of the effect of nitisinone in the United Kingdom National Alkaptonuria Centre.尼替西农可阻止褐黄病并降低尿黑酸尿症的进展速度:评价尼替西农在英国国家褐黄病中心的疗效。
Mol Genet Metab. 2018 Sep;125(1-2):127-134. doi: 10.1016/j.ymgme.2018.07.011. Epub 2018 Jul 24.
4
Nutritional interventions for patients with alkaptonuria: A minireview.黑尿症患者的营养干预:一篇综述。
Endocr Regul. 2023 Mar 26;57(1):61-67. doi: 10.2478/enr-2023-0008. Print 2023 Jan 1.
5
Ochronotic osteoarthropathy in a mouse model of alkaptonuria, and its inhibition by nitisinone.黑尿酸症小鼠模型中的褐黄病性骨关节病,以及尼替西农对此的抑制作用。
Ann Rheum Dis. 2014 Jan;73(1):284-9. doi: 10.1136/annrheumdis-2012-202878. Epub 2013 Mar 19.
6
Natural history of alkaptonuria revisited: analyses based on scoring systems.重新审视尿黑酸尿症的自然史:基于评分系统的分析。
J Inherit Metab Dis. 2011 Dec;34(6):1141-51. doi: 10.1007/s10545-011-9374-9. Epub 2011 Jul 12.
7
Dietary restriction of tyrosine and phenylalanine lowers tyrosinemia associated with nitisinone therapy of alkaptonuria.限制酪氨酸和苯丙氨酸的饮食可降低与黑尿症的尼替西农治疗相关的酪氨酸血症。
J Inherit Metab Dis. 2020 Mar;43(2):259-268. doi: 10.1002/jimd.12172. Epub 2020 Jan 13.
8
Alkaptonuria: a very rare metabolic disorder.黑尿症:一种极为罕见的代谢紊乱疾病。
Indian J Biochem Biophys. 2013 Oct;50(5):339-44.
9
Homogentisic acid induces morphological and mechanical aberration of ochronotic cartilage in alkaptonuria.高苯丙氨酸血症导致褐黄病性软骨出现形态和力学异常。
J Cell Physiol. 2019 May;234(5):6696-6708. doi: 10.1002/jcp.27416. Epub 2018 Oct 20.
10
Interference of hydroxyphenylpyruvic acid, hydroxyphenyllactic acid and tyrosine on routine serum and urine clinical chemistry assays; implications for biochemical monitoring of patients with alkaptonuria treated with nitisinone.对羟基苯丙酮酸、对羟基苯乳酸和酪氨酸对常规血清和尿液临床化学检测的干扰;对用尼替西农治疗的尿黑酸尿症患者生化监测的影响。
Clin Biochem. 2019 Sep;71:24-30. doi: 10.1016/j.clinbiochem.2019.06.010. Epub 2019 Jun 20.

引用本文的文献

1
A Comprehensive In Vitro and In Silico Approach for Targeting 4-Hydroxyphenyl Pyruvate Dioxygenase: Towards New Therapeutics for Alkaptonuria.一种针对4-羟基苯丙酮酸双加氧酶的综合体外和计算机模拟方法:迈向黑尿症的新疗法。
Int J Mol Sci. 2025 Mar 29;26(7):3181. doi: 10.3390/ijms26073181.
2
Alkaptonuria: From Molecular Insights to a Dedicated Digital Platform.尿黑酸尿症:从分子见解到专用数字平台。
Cells. 2024 Jun 20;13(12):1072. doi: 10.3390/cells13121072.
3
Acyl pyrazole sulfonamides as new antidiabetic agents: synthesis, glucosidase inhibition studies, and molecular docking analysis.

本文引用的文献

1
Bacterial quality of urinary tract in patients with alkaptonuria.尿黑酸尿症患者的尿路细菌质量。
Am J Med Sci. 2023 Apr;365(4):368-374. doi: 10.1016/j.amjms.2022.12.028. Epub 2023 Jan 3.
2
Untargeted NMR Metabolomics Reveals Alternative Biomarkers and Pathways in Alkaptonuria.非靶向 NMR 代谢组学揭示尿黑酸症中的替代生物标志物和途径。
Int J Mol Sci. 2022 Dec 13;23(24):15805. doi: 10.3390/ijms232415805.
3
Designing multi-epitope monkeypox virus-specific vaccine using immunoinformatics approach.利用免疫信息学方法设计多表位猴痘病毒特异性疫苗。
酰基吡唑磺酰胺类新型抗糖尿病药物:合成、葡萄糖苷酶抑制研究及分子对接分析
Front Chem. 2024 Apr 17;12:1380523. doi: 10.3389/fchem.2024.1380523. eCollection 2024.
4
Synthesis, Glucosidase Inhibition, and In Silico Modeling Analysis of Highly Fluorinated 2-Imino-1,3-thiazolines in Search of Potent Antidiabetic Agents.用于寻找强效抗糖尿病药物的高氟化2-亚氨基-1,3-噻唑啉的合成、葡萄糖苷酶抑制及计算机模拟分析
ACS Omega. 2024 Mar 20;9(13):15603-15614. doi: 10.1021/acsomega.4c00529. eCollection 2024 Apr 2.
5
Rationally Designed Novel Antimicrobial Peptides Targeting Chitin Synthase for Combating Soybean Phytophthora Blight.理性设计靶向几丁质合成酶的新型抗菌肽用于防治大豆疫霉病。
Int J Mol Sci. 2024 Mar 20;25(6):3512. doi: 10.3390/ijms25063512.
6
Alkaptonuria.黑尿症
Nat Rev Dis Primers. 2024 Mar 7;10(1):16. doi: 10.1038/s41572-024-00498-x.
J Infect Public Health. 2023 Jan;16(1):107-116. doi: 10.1016/j.jiph.2022.11.033. Epub 2022 Dec 6.
4
Hybrid Quinoline-Thiosemicarbazone Therapeutics as a New Treatment Opportunity for Alzheimer's Disease‒Synthesis, In Vitro Cholinesterase Inhibitory Potential and Computational Modeling Analysis.杂环喹啉硫代缩氨基脲类化合物作为阿尔茨海默病治疗的新机会——合成、体外乙酰胆碱酯酶抑制潜力及计算模拟分析。
Molecules. 2021 Oct 30;26(21):6573. doi: 10.3390/molecules26216573.
5
Natural Products-Based Drug Design against SARS-CoV-2 Mpro 3CLpro.基于天然产物的抗 SARS-CoV-2 Mpro 3CLpro 药物设计。
Int J Mol Sci. 2021 Oct 29;22(21):11739. doi: 10.3390/ijms222111739.
6
Recent Advances in the Prediction of Pharmacokinetics Properties in Drug Design Studies: A Review.药物设计研究中药代动力学性质预测的最新进展:综述
ChemMedChem. 2022 Jan 5;17(1):e202100542. doi: 10.1002/cmdc.202100542. Epub 2021 Nov 11.
7
The Antagonist pGlu-βGlu-Pro-NH Binds to an Allosteric Site of the Thyrotropin-Releasing Hormone Receptor.pGlu-βGlu-Pro-NH 与促甲状腺激素释放激素受体的别构位点结合。
Molecules. 2021 Sep 5;26(17):5397. doi: 10.3390/molecules26175397.
8
Alkaptonuria in Turkey: Clinical and molecular characteristics of 66 patients.土耳其的尿黑酸尿症:66 例患者的临床和分子特征。
Eur J Med Genet. 2021 May;64(5):104197. doi: 10.1016/j.ejmg.2021.104197. Epub 2021 Mar 18.
9
Towards a Precision Medicine Approach Based on Machine Learning for Tailoring Medical Treatment in Alkaptonuria.基于机器学习的精准医学方法在尿黑酸症中的应用
Int J Mol Sci. 2021 Jan 26;22(3):1187. doi: 10.3390/ijms22031187.
10
A black heart: Aortic valve ochronosis secondary to alkaptonuria causing aortic stenosis.一颗黑色的心脏:继发于尿黑酸尿症的主动脉瓣褐黄病导致主动脉狭窄。
J Card Surg. 2021 Feb;36(2):758-760. doi: 10.1111/jocs.15272. Epub 2021 Jan 2.