Lopez-Anido Rebecca N, Batzel Grant O, Ramirez Gabriela, Goodheart Jessica A, Wang Yiqun, Neal Stephanie, Lyons Deirdre C
bioRxiv. 2023 Mar 21:2023.03.18.532128. doi: 10.1101/2023.03.18.532128.
Molluscs are one of the most morphologically diverse clades of metazoans, exhibiting an immense diversification of calcium carbonate structures, such as the shell. Biomineralization of the calcified shell is dependent on shell matrix proteins (SMPs). While SMP diversity is hypothesized to drive molluscan shell diversity, we are just starting to unravel SMP evolutionary history and biology. Here we leveraged two complementary model mollusc systems, and , to determine the lineage-specificity of 185 SMPs. We found that 95% of the adult shell proteome belongs to conserved metazoan and molluscan orthogroups, with molluscan-restricted orthogroups containing half of all SMPs in the shell proteome. The low number of -restricted SMPs contradicts the generally-held notion that an animal’s biomineralization toolkit is dominated by mostly novel genes. Next, we selected a subset of lineage-restricted SMPs for spatial-temporal analysis using hybridization chain reaction (HCR) during larval stages in . We found that 12 out of 18 SMPs analyzed are expressed in the shell field. Notably, these genes are present in 5 expression patterns, which define at least three distinct cell populations within the shell field. These results represent the most comprehensive analysis of gastropod SMP evolutionary age and shell field expression patterns to date. Collectively, these data lay the foundation for future work to interrogate the molecular mechanisms and cell fate decisions underlying molluscan mantle specification and diversification.
软体动物是后生动物中形态多样性最高的类群之一,展现出碳酸钙结构的巨大多样性,比如贝壳。钙化贝壳的生物矿化依赖于贝壳基质蛋白(SMPs)。虽然推测SMP的多样性推动了软体动物贝壳的多样性,但我们才刚刚开始揭示SMP的进化历史和生物学特性。在这里,我们利用了两个互补的软体动物模型系统,[此处原文缺失两个模型系统的具体名称],来确定185种SMPs的谱系特异性。我们发现,成年[此处原文缺失具体物种名称]贝壳蛋白质组的95%属于保守的后生动物和软体动物直系同源组,软体动物特有的直系同源组包含贝壳蛋白质组中所有SMPs的一半。[此处原文缺失具体物种名称]特有的SMPs数量较少,这与普遍认为的动物生物矿化工具包主要由新基因主导的观点相矛盾。接下来,我们选择了一部分谱系受限的SMPs,在[此处原文缺失具体物种名称]幼虫阶段使用杂交链式反应(HCR)进行时空分析。我们发现,分析的18种SMPs中有12种在贝壳场中表达。值得注意的是,这些基因呈现出5种表达模式,这些模式定义了贝壳场内至少三个不同的细胞群体。这些结果代表了迄今为止对腹足纲动物SMP进化年龄和贝壳场表达模式最全面的分析。总体而言,这些数据为未来研究软体动物外套膜特化和多样化背后的分子机制以及细胞命运决定奠定了基础。