Bartosch Anne Marie W, Youth Elliot H H, Hansen Shania, Kaufman Maria E, Xiao Harrison, Koo So Yeon, Ashok Archana, Sivakumar Sharanya, Soni Rajesh K, Dumitrescu Logan C, Lam Tiffany G, Ropri Ali S, Lee Annie J, Klein Hans-Ulrich, Vardarajan Badri N, Bennett David A, Young-Pearse Tracy L, De Jager Philip L, Hohman Timothy J, Sproul Andrew A, Teich Andrew F
Department of Pathology and Cell Biology, Columbia University Irving Medical Center, New York, NY 10032.
Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University Irving Medical Center, New York, NY 10032.
bioRxiv. 2023 Mar 21:2023.03.21.533654. doi: 10.1101/2023.03.21.533654.
ZCCHC17 is a putative master regulator of synaptic gene dysfunction in Alzheimer's Disease (AD), and ZCCHC17 protein declines early in AD brain tissue, before significant gliosis or neuronal loss. Here, we investigate the function of ZCCHC17 and its role in AD pathogenesis. Co-immunoprecipitation of ZCCHC17 followed by mass spectrometry analysis in human iPSC-derived neurons reveals that ZCCHC17's binding partners are enriched for RNA splicing proteins. ZCCHC17 knockdown results in widespread RNA splicing changes that significantly overlap with splicing changes found in AD brain tissue, with synaptic genes commonly affected. ZCCHC17 expression correlates with cognitive resilience in AD patients, and we uncover an APOE4 dependent negative correlation of ZCCHC17 expression with tangle burden. Furthermore, a majority of ZCCHC17 interactors also co-IP with known tau interactors, and we find significant overlap between alternatively spliced genes in ZCCHC17 knockdown and tau overexpression neurons. These results demonstrate ZCCHC17's role in neuronal RNA processing and its interaction with pathology and cognitive resilience in AD, and suggest that maintenance of ZCCHC17 function may be a therapeutic strategy for preserving cognitive function in the setting of AD pathology.
ZCCHC17是阿尔茨海默病(AD)中突触基因功能障碍的假定主要调节因子,在AD脑组织中,ZCCHC17蛋白在明显的胶质细胞增生或神经元丢失之前就已早期下降。在此,我们研究了ZCCHC17的功能及其在AD发病机制中的作用。在人诱导多能干细胞衍生的神经元中对ZCCHC17进行免疫共沉淀,随后进行质谱分析,结果显示ZCCHC17的结合伙伴富含RNA剪接蛋白。敲低ZCCHC17会导致广泛的RNA剪接变化,这些变化与AD脑组织中发现的剪接变化显著重叠,突触基因通常受到影响。ZCCHC17的表达与AD患者的认知恢复力相关,并且我们发现ZCCHC17表达与缠结负担之间存在载脂蛋白E4(APOE4)依赖性负相关。此外,大多数ZCCHC17相互作用蛋白也能与已知的tau相互作用蛋白进行免疫共沉淀,并且我们发现敲低ZCCHC17的神经元和过表达tau的神经元中的可变剪接基因之间存在显著重叠。这些结果证明了ZCCHC17在神经元RNA加工中的作用及其与AD病理和认知恢复力的相互作用,并表明维持ZCCHC17功能可能是在AD病理情况下保持认知功能的一种治疗策略。