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基因(rs7137828)、(rs2745572)和(rs35934224)中的变异与巴西队列中原发性开角型青光眼发展的风险因素相关。

Association of variants in the (rs7137828), (rs2745572) and (rs35934224) genes as risk factors for primary open-angle glaucoma development in a Brazilian cohort.

机构信息

Laboratory of Human Genetics, Center for Molecular Biology and Genetic Engineering - CBMEG, University of Campinas - UNICAMP, Campinas, Brazil.

Hematology and Hemotherapy Center, University of Campinas-UNICAMP, Campinas, Brazil.

出版信息

Ophthalmic Genet. 2023 Jun;44(3):246-252. doi: 10.1080/13816810.2023.2191704. Epub 2023 Mar 30.

Abstract

BACKGROUND

Primary open-angle glaucoma (POAG), the world's main cause of irreversible blindness, is an asymptomatic and neurodegenerative disease of multifactorial etiology with ethnic and geographic disparities. Multiethnic genome-wide association studies (GWAS) identified single nucleotide variants (SNVs) in , and loci as risk factors for POAG pathophysiology and/or endophenotypes. The aim of this case-control study was to investigate the association of the variants rs7137828 (), rs2745572 (), and rs35934224 (), as risk factors for POAG development, additionally to rs7137828 association with glaucoma clinical parameters in a Brazilian cohort from the Southeast and South regions.

METHODS

This investigation comprised 506 cases and 501 controls. Variants rs2745572 and rs35934224 were genotyped through TaqMan® assays and validated by Sanger sequencing. Variant rs7137828 was genotyped exclusively by Sanger sequencing.

RESULTS

The primary research outcome revealed that the variant rs7137828 () was associated with an increased risk for the development of POAG in the presence of the TT genotype compared to the CC genotype ( = 0.006; Odds Ratio [OR] = 1.717; Confidence Interval [CI] 95% = 1.169-2.535). There was no significant association of rs2745572 and rs35934224 genotypes with POAG. The CT genotype of the rs7137828 was associated with the vertical cup-to-disk ratio (VCDR) ( = .023) but not with the age at diagnosis or the mean deviation.

CONCLUSION

Our data indicate the rs7137828 associated with increased risk for the development of POAG and VCDR in a Brazilian cohort. If validated in additional populations, these findings may enable the development of relevant strategies for early diagnosis of glaucoma in the future.

摘要

背景

原发性开角型青光眼(POAG)是世界上主要的不可逆盲眼病,是一种无症状和神经退行性疾病,具有多种病因和种族及地域差异。多民族全基因组关联研究(GWAS)已确定 和 基因座中的单核苷酸变异(SNVs)是 POAG 病理生理学和/或表型的风险因素。本病例对照研究旨在调查变体 rs7137828()、rs2745572()和 rs35934224()作为 POAG 发病风险因素的相关性,此外还调查 rs7137828 与巴西东南部和南部队列中青光眼临床参数的相关性。

方法

本研究共纳入 506 例病例和 501 例对照。通过 TaqMan®检测 rs2745572 和 rs35934224 基因型,并通过 Sanger 测序进行验证。rs7137828 仅通过 Sanger 测序进行基因分型。

结果

主要研究结果显示,与 CC 基因型相比,TT 基因型的 rs7137828()变体增加了 POAG 发病风险( = 0.006;优势比 [OR] = 1.717;95%置信区间 [CI]  = 1.169-2.535)。rs2745572 和 rs35934224 基因型与 POAG 无显著相关性。rs7137828 的 CT 基因型与垂直杯盘比(VCDR)相关( = 0.023),但与诊断年龄或平均偏差无关。

结论

本研究数据表明,rs7137828 与巴西队列中 POAG 和 VCDR 发病风险增加相关。如果在其他人群中得到验证,这些发现可能为未来开发青光眼的早期诊断提供相关策略。

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