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含新型取代肉桂酸酯的天然醇基结构的协同抗菌活性、MD 模拟研究和晶体结构。

Synergistic antimicrobial activity, MD simulation studies and crystal structure of natural alcohol motif containing novel substituted cinnamates.

机构信息

Department of Biosciences, Jamia Millia Islamia, New Delhi, India.

Department of Chemistry, Aligarh Muslim University, Aligarh, India.

出版信息

J Biomol Struct Dyn. 2024 Jan-Feb;42(1):211-230. doi: 10.1080/07391102.2023.2194004. Epub 2023 Mar 30.

Abstract

A series of natural alcohols motif containing novel substituted cinnamates were developed and screened against five bacterial strains namely, () () ()) and (). Among all cinnamates, was identified with 100% bacterial growth inhibition across the panel, except in with MIC values of 0.25 mg/mL against and whereas 0.125, 0.5 and 1 mg/mL against and , respectively. The growth inhibitory property of was further validated by disk diffusion, synergistic study and toxicity assays. Interestingly, exhibits synergistic effect in combination with the standard drug Ampicillin (AMP). The single crystal structure analysis of and was also performed which reconfirmed their proposed structures. Molecular docking visualized significant non-covalent interactions between MetAP and and the structural and conformational changes were further analysed using MD simulation studies. Overall, the study provided a suitable core for further synthetic alterations for their optimization as an antibacterial agent. Communicated by Ramaswamy H. Sarma.

摘要

一系列含有新型取代肉桂酸酯的天然醇基被开发出来,并针对五种细菌菌株进行了筛选,即()()()()和()。在所有肉桂酸酯中,化合物 被鉴定为对整个面板具有 100%的细菌生长抑制作用,除了在 中对 MIC 值为 0.25 mg/mL 外,对 和 具有抗药性,而对 和 分别为 0.125、0.5 和 1 mg/mL。化合物 的生长抑制特性通过圆盘扩散、协同研究和细胞毒性测定进一步得到验证。有趣的是,化合物 与标准药物氨苄青霉素 (AMP) 具有协同作用。化合物 和 的单晶结构分析也进行了,这再次证实了它们的结构。分子对接可视化了化合物 与 MetAP 之间的显著非共价相互作用,并且使用 MD 模拟研究进一步分析了结构和构象变化。总的来说,该研究为进一步的合成改变提供了合适的核心,以优化其作为抗菌剂的性能。由拉玛斯瓦米·H·萨玛传达。

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