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利用模拟野火评估生物结皮和裸土不同深度处微生物的存活率。

Using simulated wildland fire to assess microbial survival at multiple depths from biocrust and bare soils.

作者信息

Palmer Brianne, Pietrasiak Nicole, Cobb Polina, Lipson David

机构信息

Department of Biology, San Diego State University, San Diego, CA, United States.

Department of Plant Science, University of California, Davis, Davis, CA, United States.

出版信息

Front Microbiol. 2023 Mar 17;14:1123790. doi: 10.3389/fmicb.2023.1123790. eCollection 2023.

Abstract

INTRODUCTION

Surface soil microbial communities are directly exposed to the heat from wildland fires. Due to this, the microbial community composition may be stratified within the soil profile with more heat tolerant microbes near the surface and less heat tolerant microbes, or mobile species found deeper in the soil. Biological soil crusts, biocrusts, are found on the soil surface and contain a diverse microbial community that is directly exposed to the heat from wildland fires.

METHODS

Here, we used a simulated fire mesocosm along with a culture-based approach and molecular characterization of microbial isolates to understand the stratification of biocrust and bare soil microbes after low severity (450°C) and high severity (600°C) fires. We cultured and sequenced microbial isolates from 2 to 6 cm depth from both fire types.

RESULTS

The isolates were stratified along the soil depth. Green algal isolates were less thermotolerant and found in the deeper depths (4-6 cm) and the control soils, while several cyanobacteria in Oscillatoriales, Synechococcales, and Nostocales were found at 2-3 cm depth for both fire temperatures. An Alphaproteobacteria isolate was common across several depths, both fire types, and both fire temperatures. Furthermore, we used RNA sequencing at three depths after the high severity fire and one control to determine what microbial community is active following a fire. The community was dominated by Gammaproteobacteria, however some Cyanobacteria ASVs were also present.

DISCUSSION

Here we show evidence of stratification of soil and biocrust microbes after a fire and provide evidence that these microbes are able to survive the heat from the fire by living just below the soil surface. This is a steppingstone for future work on the mechanisms of microbial survival after fire and the role of soil insulation in creating resilient communities.

摘要

引言

表层土壤微生物群落直接暴露于野火产生的热量中。因此,微生物群落组成可能在土壤剖面中分层,表层附近有更多耐热微生物,而土壤深处则有耐热性较差的微生物或可移动物种。生物土壤结皮,即生物结皮,存在于土壤表面,包含一个直接暴露于野火热量的多样微生物群落。

方法

在此,我们使用了模拟火灾中型生态系统,结合基于培养的方法和微生物分离株的分子特征,以了解低强度(450°C)和高强度(600°C)火灾后生物结皮和裸土微生物的分层情况。我们从两种火灾类型的2至6厘米深度培养并测序微生物分离株。

结果

分离株沿土壤深度分层。绿藻分离株耐热性较差,存在于较深深度(4 - 6厘米)和对照土壤中,而在两种火灾温度下,颤藻目、聚球藻目和念珠藻目的几种蓝细菌在2 - 3厘米深度被发现。一种α-变形菌分离株在多个深度、两种火灾类型和两种火灾温度下都很常见。此外,我们在高强度火灾后的三个深度和一个对照深度进行了RNA测序,以确定火灾后哪些微生物群落是活跃的。该群落以γ-变形菌为主,但也存在一些蓝细菌扩增子序列变体。

讨论

在此我们展示了火灾后土壤和生物结皮微生物分层的证据,并提供证据表明这些微生物能够通过生活在土壤表层下方而在火灾产生的热量中存活。这是未来研究火灾后微生物生存机制以及土壤隔热在创建有复原力群落中的作用的垫脚石。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/210c/10064808/c5c20bb8a31e/fmicb-14-1123790-g001.jpg

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本文引用的文献

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