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NASHmap:一种机器学习模型在真实环境中识别 NASH 风险患者的临床应用。

NASHmap: clinical utility of a machine learning model to identify patients at risk of NASH in real-world settings.

机构信息

Metabolic Liver Research Program, I. Department of Medicine, University Medical Center, Mainz, Germany.

Novartis Pharma AG, Basel, Switzerland.

出版信息

Sci Rep. 2023 Apr 5;13(1):5573. doi: 10.1038/s41598-023-32551-2.

DOI:10.1038/s41598-023-32551-2
PMID:37019931
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10076319/
Abstract

The NASHmap model is a non-invasive tool using 14 variables (features) collected in standard clinical practice to classify patients as probable nonalcoholic steatohepatitis (NASH) or non-NASH, and here we have explored its performance and prediction accuracy. The National Institute of Diabetes and Digestive Kidney Diseases (NIDDK) NAFLD Adult Database and the Optum Electronic Health Record (EHR) were used for patient data. Model performance metrics were calculated from correct and incorrect classifications for 281 NIDDK (biopsy-confirmed NASH and non-NASH, with and without stratification by type 2 diabetes status) and 1,016 Optum (biopsy-confirmed NASH) patients. NASHmap sensitivity in NIDDK is 81%, with a slightly higher sensitivity in T2DM patients (86%) than non-T2DM patients (77%). NIDDK patients misclassified by NASHmap had mean feature values distinct from correctly predicted patients, particularly for aspartate transaminase (AST; 75.88 U/L true positive vs 34.94 U/L false negative), and alanine transaminase (ALT; 104.09 U/L vs 47.99 U/L). Sensitivity was slightly lower in Optum at 72%. In an undiagnosed Optum cohort at risk for NASH (n = 2.9 M), NASHmap predicted 31% of patients as NASH. This predicted NASH group had AST and ALT mean levels above normal range of 0-35 U/L, and 87% had HbA1C levels > 5.7%. Overall, NASHmap demonstrates good sensitivity in predicting NASH status in both datasets, and NASH patients misclassified as non-NASH by NASHmap have clinical profiles closer to non-NASH patients.

摘要

NASHmap 模型是一种非侵入性工具,使用在标准临床实践中收集的 14 个变量(特征)来对患者进行分类,分为可能的非酒精性脂肪性肝炎(NASH)或非 NASH,我们在此探索了其性能和预测准确性。使用了国家糖尿病、消化和肾脏疾病研究所(NIDDK)的非酒精性脂肪性肝病成人数据库和 Optum 电子健康记录(EHR)来获取患者数据。模型性能指标是根据 281 名 NIDDK(经活检证实的 NASH 和非 NASH,有和无 2 型糖尿病状态分层)和 1016 名 Optum(经活检证实的 NASH)患者的正确和错误分类计算得出的。在 NIDDK 中,NASHmap 的灵敏度为 81%,在 2 型糖尿病患者(86%)中略高于非 2 型糖尿病患者(77%)。NASHmap 错误分类的 NIDDK 患者的特征值平均值与正确预测的患者明显不同,特别是天冬氨酸转氨酶(AST;75.88 U/L 真阳性 vs 34.94 U/L 假阴性)和丙氨酸转氨酶(ALT;104.09 U/L vs 47.99 U/L)。在 Optum 中的灵敏度略低,为 72%。在一个患有 NASH 风险的未确诊的 Optum 队列(n=290 万)中,NASHmap 预测 31%的患者患有 NASH。这个预测的 NASH 组的 AST 和 ALT 平均值高于 0-35 U/L 的正常范围,87%的患者 HbA1C 水平>5.7%。总的来说,NASHmap 在两个数据集预测 NASH 状态方面均具有良好的灵敏度,并且被 NASHmap 错误分类为非 NASH 的 NASH 患者的临床特征更接近非 NASH 患者。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c41/10076319/62e7d387ddad/41598_2023_32551_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c41/10076319/62e7d387ddad/41598_2023_32551_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5c41/10076319/62e7d387ddad/41598_2023_32551_Fig1_HTML.jpg

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