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基因组和代谢分析揭示了古菌中的拮抗型兰尼肽。

Genomic and metabolic analyses reveal antagonistic lanthipeptides in archaea.

机构信息

Department of Chemistry and The Swire Institute of Marine Science, The University of Hong Kong, Pokfulam Road, Hong Kong, China.

Chemistry and Chemical Engineering Guangdong Laboratory, Shantou, 515031, China.

出版信息

Microbiome. 2023 Apr 14;11(1):74. doi: 10.1186/s40168-023-01521-1.

Abstract

BACKGROUND

Microbes produce diverse secondary metabolites (SMs) such as signaling molecules and antimicrobials that mediate microbe-microbe interaction. Archaea, the third domain of life, are a large and diverse group of microbes that not only exist in extreme environments but are abundantly distributed throughout nature. However, our understanding of archaeal SMs lags far behind our knowledge of those in bacteria and eukarya.

RESULTS

Guided by genomic and metabolic analysis of archaeal SMs, we discovered two new lanthipeptides with distinct ring topologies from a halophilic archaeon of class Haloarchaea. Of these two lanthipeptides, archalan α exhibited anti-archaeal activities against halophilic archaea, potentially mediating the archaeal antagonistic interactions in the halophilic niche. To our best knowledge, archalan α represents the first lantibiotic and the first anti-archaeal SM from the archaea domain.

CONCLUSIONS

Our study investigates the biosynthetic potential of lanthipeptides in archaea, linking lanthipeptides to antagonistic interaction via genomic and metabolic analyses and bioassay. The discovery of these archaeal lanthipeptides is expected to stimulate the experimental study of poorly characterized archaeal chemical biology and highlight the potential of archaea as a new source of bioactive SMs. Video Abstract.

摘要

背景

微生物产生多种次级代谢产物(SMs),如信号分子和抗菌物质,介导微生物-微生物相互作用。古菌是生命的第三大域,是一个庞大而多样的微生物群体,不仅存在于极端环境中,而且在自然界中广泛分布。然而,我们对古菌 SMs 的理解远远落后于对细菌和真核生物 SMs 的理解。

结果

通过对古菌 SMs 的基因组和代谢分析的指导,我们从嗜盐古菌中发现了两种具有独特环拓扑结构的新型类肽。这两种类肽中,archalanα对嗜盐古菌具有抗古菌活性,可能介导了嗜盐生境中古菌的拮抗相互作用。据我们所知,archalanα 代表了第一个来自古菌域的类抗生素和第一个抗古菌 SM。

结论

我们的研究调查了古菌中类肽的生物合成潜力,通过基因组和代谢分析以及生物测定将类肽与拮抗相互作用联系起来。这些古菌类肽的发现有望刺激对研究较少的古菌化学生物学的实验研究,并强调古菌作为生物活性 SMs 的新来源的潜力。视频摘要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a94/10105419/a89f12969dae/40168_2023_1521_Fig1_HTML.jpg

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