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探索嗜盐环境作为新型抗生素的来源。

Exploring halophilic environments as a source of new antibiotics.

机构信息

Biofilm Research Group, School of Pharmacy, Queen's University Belfast, Belfast, UK.

出版信息

Crit Rev Microbiol. 2024 May;50(3):341-370. doi: 10.1080/1040841X.2023.2197491. Epub 2023 Apr 20.

DOI:10.1080/1040841X.2023.2197491
PMID:37079280
Abstract

Microbial natural products from microbes in extreme environments, including haloarchaea, and halophilic bacteria, possess a huge capacity to produce novel antibiotics. Additionally, enhanced isolation techniques and improved tools for genomic mining have expanded the efficiencies in the antibiotic discovery process. This review article provides a detailed overview of known antimicrobial compounds produced by halophiles from all three domains of life. We summarize that while halophilic bacteria, in particular actinomycetes, contribute the vast majority of these compounds the importance of understudied halophiles from other domains of life requires additional consideration. Finally, we conclude by discussing upcoming technologies- enhanced isolation and metagenomic screening, as tools that will be required to overcome the barriers to antimicrobial drug discovery. This review highlights the potential of these microbes from extreme environments, and their importance to the wider scientific community, with the hope of provoking discussion and collaborations within halophile biodiscovery. Importantly, we emphasize the importance of bioprospecting from communities of lesser-studied halophilic and halotolerant microorganisms as sources of novel therapeutically relevant chemical diversity to combat the high rediscovery rates. The complexity of halophiles will necessitate a multitude of scientific disciplines to unravel their potential and therefore this review reflects these research communities.

摘要

来自极端环境中的微生物(包括盐杆菌和嗜盐菌)的微生物天然产物具有产生新型抗生素的巨大潜力。此外,增强的分离技术和用于基因组挖掘的改进工具提高了抗生素发现过程的效率。本文综述了来自所有三个生命领域的嗜盐微生物产生的已知抗菌化合物。我们总结到,虽然嗜盐细菌,特别是放线菌,贡献了这些化合物的绝大多数,但来自其他生命领域的研究较少的嗜盐微生物的重要性需要进一步考虑。最后,我们通过讨论即将出现的技术——增强的分离和宏基因组筛选来结束讨论,这些技术将是克服抗菌药物发现障碍所必需的工具。本文综述了这些来自极端环境的微生物的潜力及其对更广泛科学界的重要性,希望能激发嗜盐生物发现领域内的讨论和合作。重要的是,我们强调了从研究较少的嗜盐和耐盐微生物群落中进行生物勘探的重要性,因为这些群落是寻找新型治疗相关化学多样性的来源,以对抗高重发现率。嗜盐微生物的复杂性将需要多个科学学科来揭示它们的潜力,因此本文综述反映了这些研究社区。

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