Department of Cell Biology and Biochemistry, Department of Surgery, Texas Tech University Health Sciences Center, 3601 4th Street, Lubbock, TX, 79430, USA.
Department of Cellular and Molecular Biology, University of Washington, 1400 NE Campus Parkway, Seattle, WA, 98195, USA.
Breast Cancer Res. 2023 Apr 20;25(1):44. doi: 10.1186/s13058-023-01615-6.
Triple-negative breast cancer (TNBC) affects young women and is the most aggressive subtype of breast cancer (BC). TNBCs disproportionally affect women of African-American (AA) descent compared to other ethnicities. We have identified DNA repair gene RAD51 as a poor prognosis marker in TNBC and its posttranscriptional regulation through microRNAs (miRNAs). This study aims to delineate the mechanisms leading to RAD51 upregulation and develop novel therapeutic combinations to effectively treat TNBCs and reduce disparity in clinical outcomes.
Analysis of TCGA data for BC cohorts using the UALCAN portal and PrognoScan identified the overexpression of RAD51 in TNBCs. miRNA sequencing identified significant downregulation of RAD51-targeting miRNAs miR-214-5P and miR-142-3P. RT-PCR assays were used to validate the levels of miRNAs and RAD51, and immunohistochemical and immunoblotting techniques were used similarly for RAD51 protein levels in TNBC tissues and cell lines. Luciferase assays were performed under the control of RAD51 3'-UTR to confirm that miR-214-5P regulates RAD51 expression. To examine the effect of miR-214-5P-mediated downregulation of RAD51 on homologous recombination (HR) in TNBC cells, Dr-GFP reporter assays were performed. To assess the levels of olaparib-induced DNA damage responses in miR-214-5P, transfected cells, immunoblots, and immunofluorescence assays were used. Furthermore, COMET assays were used to measure DNA lesions and colony assays were performed to assess the sensitivity of BRCA-proficient TNBC cells to olaparib.
In-silico analysis identified upregulation of RAD51 as a poor prognostic marker in TNBCs. miRNA-seq data showed significant downregulation of miR-214-5P and miR-142-3P in TNBC cell lines derived from AA women compared to Caucasian-American (CA) women. miR-214-5P mimics downregulated RAD51 expression and induces HR deficiency as measured by Dr-GFP assays in these cell lines. Based on these results, we designed a combination treatment of miR-214-5P and olaparib in HR-proficient AA TNBC cell lines using clonogenic survival assays. The combination of miR-214-5P and olaparib showed synergistic lethality compared to individual treatments in these cell lines.
Our studies identified a novel epigenetic regulation of RAD51 in TNBCs by miR-214-5P suggesting a novel combination therapies involving miR-214-5P and olaparib to treat HR-proficient TNBCs and to reduce racial disparity in therapeutic outcomes.
三阴性乳腺癌(TNBC)影响年轻女性,是乳腺癌(BC)最具侵袭性的亚型。与其他族裔相比,TNBC 不成比例地影响非裔美国(AA)女性。我们已经确定 DNA 修复基因 RAD51 是 TNBC 的预后不良标志物,并通过 microRNAs(miRNAs)对其进行转录后调控。本研究旨在描绘导致 RAD51 上调的机制,并开发新的治疗组合,以有效治疗 TNBC 并减少临床结果的差异。
使用 UALCAN 门户和 PrognoScan 对 TCGA BC 队列进行数据分析,发现 TNBC 中 RAD51 的过度表达。miRNA 测序确定了 RAD51 靶向 miRNA miR-214-5P 和 miR-142-3P 的显著下调。RT-PCR 检测用于验证 miRNA 和 RAD51 的水平,免疫组织化学和免疫印迹技术同样用于 TNBC 组织和细胞系中 RAD51 蛋白水平。荧光素酶测定在 RAD51 3'-UTR 的控制下进行,以确认 miR-214-5P 调节 RAD51 表达。为了研究 miR-214-5P 介导的 RAD51 下调对 TNBC 细胞中同源重组(HR)的影响,进行了 Dr-GFP 报告基因检测。为了评估 miR-214-5P 转染细胞中奥拉帕利诱导的 DNA 损伤反应水平,使用免疫印迹和免疫荧光检测。此外,还使用彗星检测评估 DNA 损伤和集落检测评估 BRCA 阳性 TNBC 细胞对奥拉帕利的敏感性。
基于计算分析,RAD51 的上调被确定为 TNBC 的预后不良标志物。miRNA-seq 数据显示,与高加索裔(CA)女性相比,源自 AA 女性的 TNBC 细胞系中 miR-214-5P 和 miR-142-3P 的表达显著下调。miR-214-5P 模拟物下调这些细胞系中 RAD51 的表达,并通过 Dr-GFP 检测诱导 HR 缺陷。基于这些结果,我们使用集落存活检测设计了 HR 阳性 AA TNBC 细胞系中 miR-214-5P 和奥拉帕利的联合治疗。与单独治疗相比,miR-214-5P 和奥拉帕利的联合治疗在这些细胞系中表现出协同致死作用。
我们的研究确定了 miR-214-5P 在 TNBC 中对 RAD51 的新型表观遗传调控,提示涉及 miR-214-5P 和奥拉帕利的新型联合治疗方法可用于治疗 HR 阳性 TNBC 并减少治疗结果的种族差异。