Mallesh Rathnam, Gharai Prabir Kumar, Gupta Varsha, Roy Rajsekhar, Ghosh Surajit
Department of Bioscience & Bioengineering, Indian Institute of Technology, Jodhpur, NH 65, Surpura Bypass Road, Karwar, Rajasthan 342037, India.
Organic and Medicinal Chemistry and Structural Biology and Bioinformatics Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S. C. Mullick Road, Jadavpur, Kolkata, West Bengal 700 032, India.
ACS Bio Med Chem Au. 2023 Feb 15;3(2):158-173. doi: 10.1021/acsbiomedchemau.2c00067. eCollection 2023 Apr 19.
Polymerization of soluble amyloid beta (Aβ) peptide into protease-stable insoluble fibrillary aggregates is a critical step in the pathogenesis of Alzheimer's disease (AD). The N-terminal (NT) hydrophobic central domain fragment 16KLVFF20 plays an important role in the formation and stabilization of β-sheets by self-recognition of the parent Aβ peptide, followed by aggregation of Aβ in the AD brain. Here, we analyze the effect of the NT region inducing β-sheet formation in the Aβ peptide by a single amino acid mutation in the native Aβ peptide fragment. We designed 14 hydrophobic peptides (NT-01 to NT-14) by a single mutation at 18Val by using hydrophobic residues leucine and proline in the natural Aβ peptide fragment (KLVFFAE) and analyzed its effect on the formation of Aβ aggregates. Among all these peptides, NT-02, NT-03, and NT-13 significantly affected the Aβ aggregate formation. When the NT peptides were coincubated with the Aβ peptide, a significant reduction in β-sheet formation and increment in random coil content of Aβ was seen, confirmed by circular dichroism spectroscopy and Fourier transform infrared spectroscopy, followed by the reduction of fibril formation measured by the thioflavin-T (ThT) binding assay. The aggregation inhibition was monitored by Congo red and ThT staining and electron microscopic examination. Moreover, the NT peptides protect the PC-12 differentiated neurons from Aβ-induced toxicity and apoptosis in vitro. Thus, manipulation of the Aβ secondary structure with protease-stable ligands that promote the random coil conformation may provide a tool to control the Aβ aggregates observed in AD patients.
可溶性淀粉样β(Aβ)肽聚合成蛋白酶稳定的不溶性纤维状聚集体是阿尔茨海默病(AD)发病机制中的关键步骤。N端(NT)疏水中心结构域片段16KLVFF20通过母本Aβ肽的自我识别在β折叠的形成和稳定中发挥重要作用,随后Aβ在AD大脑中聚集。在此,我们通过天然Aβ肽片段中的单个氨基酸突变分析NT区域诱导Aβ肽中β折叠形成的作用。我们通过在天然Aβ肽片段(KLVFFAE)中的18Val处进行单个突变,使用疏水性残基亮氨酸和脯氨酸设计了14种疏水肽(NT-01至NT-14),并分析了其对Aβ聚集体形成的影响。在所有这些肽中,NT-02、NT-03和NT-13显著影响Aβ聚集体的形成。当NT肽与Aβ肽共孵育时,通过圆二色光谱和傅里叶变换红外光谱证实,Aβ的β折叠形成显著减少,无规卷曲含量增加,随后通过硫黄素-T(ThT)结合试验测量的纤维形成减少。通过刚果红和ThT染色以及电子显微镜检查监测聚集抑制。此外,NT肽在体外保护PC-12分化神经元免受Aβ诱导的毒性和凋亡。因此,用促进无规卷曲构象的蛋白酶稳定配体操纵Aβ二级结构可能提供一种工具来控制在AD患者中观察到的Aβ聚集体。