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葡萄牙普通菜豆种质中数量抗性的寡基因控制揭示了白粉病。

Oligogenic Control of Quantitative Resistance Against Powdery Mildew Revealed in Portuguese Common Bean Germplasm.

机构信息

ITQB NOVA, Oeiras, Portugal.

IAS-CSIC, Córdoba, Spain.

出版信息

Plant Dis. 2023 Oct;107(10):3113-3122. doi: 10.1094/PDIS-02-23-0313-RE. Epub 2023 Oct 20.

DOI:10.1094/PDIS-02-23-0313-RE
PMID:37102726
Abstract

Common bean ( L.) is one of the most important food legumes worldwide, and its production is severely affected by fungal diseases such as powdery mildew. Portugal has a diverse germplasm, with accessions of Andean, Mesoamerican, and admixed origin, making it a valuable resource for common bean genetic studies. In this work, we evaluated the response of a Portuguese collection of 146 common bean accessions to infection, observing a wide range of disease severity and different levels of compatible and incompatible reactions, revealing the presence of different resistance mechanisms. We identified 11 incompletely hypersensitive resistant and 80 partially resistant accessions. We performed a genome-wide association study to clarify its genetic control, resulting in the identification of eight disease severity-associated single-nucleotide polymorphisms, spread across chromosomes Pv03, Pv09, and Pv10. Two of the associations were unique to partial resistance and one to incomplete hypersensitive resistance. The proportion of variance explained by each association varied between 15 and 86%. The absence of a major locus, together with the relatively small number of loci controlling disease severity, suggested an oligogenic inheritance of both types of resistance. Seven candidate genes were proposed, including a disease resistance protein (toll interleukin 1 receptor-nucleotide binding site-leucine-rich repeat class), an NF-Y transcription factor complex component, and an ABC-2 type transporter family protein. This work contributes with new resistance sources and genomic targets valuable to develop selection molecular tools and support powdery mildew resistance precision breeding in common bean.

摘要

菜豆是世界上最重要的食用豆类之一,其生产受到白粉病等真菌病害的严重影响。葡萄牙拥有多样化的种质资源,包括安第斯、中美洲和混合起源的品种,这使其成为菜豆遗传研究的宝贵资源。在这项工作中,我们评估了葡萄牙 146 个菜豆品种对 感染的反应,观察到广泛的疾病严重程度和不同水平的亲和和不亲和反应,揭示了不同的抗性机制的存在。我们确定了 11 个不完全过敏性抗性和 80 个部分抗性品种。我们进行了全基因组关联研究来阐明其遗传控制,结果确定了 8 个与疾病严重程度相关的单核苷酸多态性,分布在 Pv03、Pv09 和 Pv10 染色体上。其中两个关联是部分抗性所特有的,一个是不完全过敏性抗性所特有的。每个关联解释的方差比例在 15%到 86%之间变化。缺乏主要基因座,加上控制疾病严重程度的基因座数量相对较少,表明两种抗性的遗传方式是寡基因的。提出了 7 个候选基因,包括一个疾病抗性蛋白(toll 白细胞介素 1 受体核苷酸结合位点亮氨酸丰富重复类)、一个 NF-Y 转录因子复合物成分和一个 ABC-2 型转运蛋白家族蛋白。这项工作为开发选择分子工具提供了新的抗性资源和基因组靶标,支持菜豆白粉病抗性的精准育种。

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