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从哥伦比亚蚊子中分离出的新型假定病毒。

Novel Putative -like Virus Isolated from Mosquitoes in Colombia.

机构信息

CIST-Centro de Investigación en Salud para el Trópico, Facultad de Medicina, Universidad Cooperativa de Colombia, Santa Marta 470003, Colombia.

Grupo de Virología, Dirección de Redes en Salud Pública, Instituto Nacional de Salud, Bogota 111321, Colombia.

出版信息

Viruses. 2023 Apr 13;15(4):953. doi: 10.3390/v15040953.


DOI:10.3390/v15040953
PMID:37112933
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10143313/
Abstract

The family comprises positive-sense RNA viruses, which mainly infect plants. Recently, a few -like viruses have been found in mosquitoes, which feed on vertebrate sources. We describe a novel -like virus, putatively named, (GUAV), isolated from and species of mosquitoes and collected in the rural area of Santa Marta, Colombia. After a cytopathic effect was observed in C6/36 cells, RNA was extracted and processed through the NetoVIR next-generation sequencing protocol, and data were analyzed through the VirMAP pipeline. Molecular and phenotypic characterization of the GUAV was achieved using a 5'/3' RACE, transmission electron microscopy, amplification in vertebrate cells, and phylogenetic analysis. A cytopathic effect was observed in C6/36 cells three days post-infection. The GUAV genome was successfully assembled, and its polyadenylated 3' end was corroborated. GUAV shared only 54.9% amino acid identity with its closest relative, , and was grouped with the latter and other unclassified insect-associated tymoviruses in a phylogenetic analysis. GUAV is a new member of a family previously described as comprising plant-infecting viruses, which seem to infect and replicate in mosquitoes. The sugar- and blood-feeding behavior of the spp., implies a sustained contact with plants and vertebrates and justifies further studies to unravel the ecological scenario for transmission.

摘要

该家族包括正链 RNA 病毒,主要感染植物。最近,在以脊椎动物为食的蚊子中发现了几种类似的病毒。我们描述了一种新型类似病毒,暂定名为,(GUAV),从哥伦比亚圣玛尔塔农村地区采集的 和 蚊子中分离出来。在 C6/36 细胞中观察到细胞病变效应后,提取 RNA,并通过 NetoVIR 下一代测序方案进行处理,通过 VirMAP 管道进行数据分析。通过 5'/3' RACE、透射电子显微镜、在脊椎动物细胞中的扩增以及系统发育分析对 GUAV 的分子和表型特征进行了研究。感染后三天,C6/36 细胞中观察到细胞病变效应。成功组装了 GUAV 基因组,并证实了其多聚腺苷酸化 3'末端。GUAV 与最接近的亲缘病毒,仅共享 54.9%的氨基酸同一性,与后者和其他未分类的昆虫相关 tymoviruses 在系统发育分析中分组。GUAV 是一个以前被描述为包含感染植物的病毒的家族的新成员,这些病毒似乎在蚊子中感染和复制。 spp. 的糖和血食行为意味着与植物和脊椎动物的持续接触,这证明有必要进一步研究以揭示传播的生态情景。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/ecc026d26fd2/viruses-15-00953-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/917bc1c1d0d1/viruses-15-00953-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/1febaaa50203/viruses-15-00953-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/ff57780378a3/viruses-15-00953-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/ecc026d26fd2/viruses-15-00953-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/917bc1c1d0d1/viruses-15-00953-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/1febaaa50203/viruses-15-00953-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/ff57780378a3/viruses-15-00953-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65a7/10143313/ecc026d26fd2/viruses-15-00953-g004.jpg

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引用本文的文献

[1]
Virome Survey of Banana Plantations and Surrounding Plants in Malawi.

Viruses. 2025-7-31

[2]
Metagenomic analysis evidences a core virome in Anopheles darlingi from three contrasting Colombian ecoregions.

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[3]
Suppressing Tymovirus replication in plants using a variant of ubiquitin.

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[4]
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Front Microbiol. 2024-1-3

[5]
Characterizing viral species in mosquitoes (Culicidae) in the Colombian Orinoco: insights from a preliminary metagenomic study.

Sci Rep. 2023-12-12

本文引用的文献

[1]
Discovery and genome sequencing of a new virus related to members of the family Tymoviridae, isolated from mosquitoes of the genus Mansonia in Brazil.

Arch Virol. 2022-9

[2]
Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay.

Elife. 2021-4-27

[3]
The InterPro protein families and domains database: 20 years on.

Nucleic Acids Res. 2021-1-8

[4]
Deciphering the Virome of Subgroup Mosquitoes, the Major Vectors of Japanese Encephalitis, in Japan.

Viruses. 2020-2-28

[5]
IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era.

Mol Biol Evol. 2020-5-1

[6]
An Ecosystems Perspective on Virus Evolution and Emergence.

Trends Microbiol. 2020-3

[7]
Meta-Transcriptomic Comparison of the RNA Viromes of the Mosquito Vectors and in Northern Europe.

Viruses. 2019-11-6

[8]
Viromics Reveal a Number of Novel RNA Viruses in Swedish Mosquitoes.

Viruses. 2019-11-5

[9]
Discovery of a novel Tymoviridae-like virus in mosquitoes from Mexico.

Arch Virol. 2019-2

[10]
Detection of novel and recognized RNA viruses in mosquitoes from the Yucatan Peninsula of Mexico using metagenomics and characterization of their in vitro host ranges.

J Gen Virol. 2018-11-9

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