Tang Gonglin, Sun Kai, Ding Guixin, Wu Jitao
Department of Urology, The Affiliated Yantai Yuhuangding Hospital of Qingdao University, Yantai, Shandong, 264000, People's Republic of China.
Urology Department, Shandong Province Hospital, Shandong University, Jinan, 250021, People's Republic of China.
Int J Gen Med. 2023 Apr 20;16:1437-1453. doi: 10.2147/IJGM.S408854. eCollection 2023.
Kidney renal clear cell carcinoma (KIRC) is a common cancer in people worldwide, and one of the main issues is developing suitable biomarkers. This study aims to investigate the expression of TSTD2 in KIRC and its impact on prognosis.
RNA sequencing data from TCGA and GTEx were gathered to examine the functional enrichment of TSTD2-related differentially expressed genes (DEGs) using GO/KEGG, GSEA, immunocyte permeation analysis, and protein-protein interaction (PPI) network analysis. The Kaplan‒Meier-Cox regression model and the prognostic nomograph model were used to assess the clinical importance of TSTD2 in KIRC. R software was used to analyze the included studies. Finally, verification of cells and tissues was performed using immunohistochemical staining and quantitative real‒time PCR.
In contrast to normal samples, it was discovered that TSTD2 was underexpressed in a number of malignancies, including KIRC. Furthermore, in 163 KIRC samples, low expression of TSTD2 was linked to a poor prognosis, as were subgroups with age greater than 60, the integrin pathway, the development of elastic fibers, and high TNM stage, pathologic stage, and histologic grade (P < 0.05). Age and TNM stage were included in the nomogram prognostic model, and low TSTD2 was a prognostic predictor that could be used independently in Cox regression analysis. In addition, 408 DEGs with 111 upregulated genes and 297 downregulated genes were found between the high- and low-expression groups.
The diminished expression of TSTD2 may serve as a biomarker for unfavorable outcomes in KIRC, and holds potential as a target for therapeutic interventions.
肾透明细胞癌(KIRC)是全球常见的癌症,主要问题之一是开发合适的生物标志物。本研究旨在探讨TSTD2在KIRC中的表达及其对预后的影响。
收集来自TCGA和GTEx的RNA测序数据,使用GO/KEGG、GSEA、免疫细胞浸润分析和蛋白质-蛋白质相互作用(PPI)网络分析来检查TSTD2相关差异表达基因(DEGs)的功能富集情况。使用Kaplan-Meier-Cox回归模型和预后列线图模型评估TSTD2在KIRC中的临床重要性。使用R软件分析纳入的研究。最后,通过免疫组织化学染色和定量实时PCR对细胞和组织进行验证。
与正常样本相比,发现TSTD2在包括KIRC在内的多种恶性肿瘤中表达不足。此外,在163例KIRC样本中,TSTD2低表达与预后不良相关,年龄大于60岁的亚组、整合素途径、弹性纤维的发育以及高TNM分期、病理分期和组织学分级也与预后不良相关(P < 0.05)。列线图预后模型纳入了年龄和TNM分期,低TSTD2是一种预后预测指标,可在Cox回归分析中独立使用。此外,在高表达组和低表达组之间发现了408个DEGs,其中111个基因上调,297个基因下调。
TSTD2表达降低可能是KIRC不良预后的生物标志物,并有作为治疗干预靶点的潜力。