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静电诱导的蛋白质聚集核化构象转变

Electrostatics-Induced Nucleated Conformational Transition of Protein Aggregation.

作者信息

Duan Chao, Wang Rui

机构信息

Department of Chemical and Biomolecular Engineering, University of California Berkeley, California 94720, USA.

Materials Sciences Division, Lawrence Berkeley National Lab, Berkeley, California 94720, USA.

出版信息

Phys Rev Lett. 2023 Apr 14;130(15):158401. doi: 10.1103/PhysRevLett.130.158401.

DOI:10.1103/PhysRevLett.130.158401
PMID:37115902
Abstract

Despite the wide existence of protein aggregation in nature and its intimate connection to many human diseases, the underlying mechanism remains unclear. Here, we develop a molecular theory by systematically incorporating the self-consistent field theory for charged macromolecules into the dilute solution thermodynamics. The kinetic pathway is tracked without any restriction on the morphology of the aggregates. We find that protein aggregation at low salt concentrations is via a two-step nucleated process involving a conformational transition from metastable spherical oligomer to elongated fibril. The scaling analysis elucidates the electrostatic origin of the conformational transition: the fibril enters the screening region much earlier than the spherical aggregate. As salt concentration increases, the classical mode of one-step nucleation corresponding to macroscopic liquid-liquid phase separation is recovered. Our results reveal that the screened electrostatic interaction is essential for the existence of the metastable oligomer and its subsequent conformational transition to fibril. The theoretical predictions of the kinetic pathway and the morphology of the aggregates are in good agreement with the experimental observations of real proteins.

摘要

尽管蛋白质聚集在自然界广泛存在且与许多人类疾病密切相关,但其潜在机制仍不清楚。在此,我们通过将带电大分子的自洽场理论系统地纳入稀溶液热力学,发展了一种分子理论。在不对聚集体形态作任何限制的情况下追踪动力学途径。我们发现低盐浓度下的蛋白质聚集是通过两步成核过程进行的,该过程涉及从亚稳态球形寡聚体到细长纤维的构象转变。标度分析阐明了构象转变的静电起源:纤维比球形聚集体更早进入屏蔽区域。随着盐浓度增加,对应于宏观液 - 液相分离的经典一步成核模式得以恢复。我们的结果表明,屏蔽的静电相互作用对于亚稳态寡聚体的存在及其随后向纤维的构象转变至关重要。聚集体动力学途径和形态的理论预测与真实蛋白质的实验观察结果高度吻合。

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Effects of Ionic Strength on the Morphology, Scattering, and Mechanical Response of Neurofilament-Derived Protein Brushes.离子强度对神经丝衍生蛋白刷的形态、散射和力学响应的影响。
Biomacromolecules. 2024 Jan 8;25(1):328-337. doi: 10.1021/acs.biomac.3c01002. Epub 2023 Dec 5.