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The high-quality genome of lotus reveals tandem duplicate genes involved in stress response and secondary metabolites biosynthesis.

作者信息

Qi Huanhuan, Yu Feng, Deng Jiao, Zhang Liangsheng, Yang Pingfang

机构信息

State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan 430026, China.

Research Center of Buckwheat Industry Technology, Guizhou Normal University, Guiyang 550001, China.

出版信息

Hortic Res. 2023 Feb 28;10(5):uhad040. doi: 10.1093/hr/uhad040. eCollection 2023 May.

DOI:10.1093/hr/uhad040
PMID:37159801
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10163359/
Abstract
摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c84/10163359/83b2263d486b/uhad040f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c84/10163359/83b2263d486b/uhad040f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1c84/10163359/83b2263d486b/uhad040f1.jpg

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本文引用的文献

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Genome Warehouse: A Public Repository Housing Genome-scale Data.基因组仓库:一个存储基因组规模数据的公共存储库。
Genomics Proteomics Bioinformatics. 2021 Aug;19(4):584-589. doi: 10.1016/j.gpb.2021.04.001. Epub 2021 Jun 24.
3
Distinct Expression and Methylation Patterns for Genes with Different Fates following a Single Whole-Genome Duplication in Flowering Plants.
在有花植物中,单个全基因组复制后具有不同命运的基因表现出不同的表达和甲基化模式。
Mol Biol Evol. 2020 Aug 1;37(8):2394-2413. doi: 10.1093/molbev/msaa105.
4
Assessing genome assembly quality using the LTR Assembly Index (LAI).使用长末端重复序列组装指数(LAI)评估基因组组装质量。
Nucleic Acids Res. 2018 Nov 30;46(21):e126. doi: 10.1093/nar/gky730.
5
Investigation of benzylisoquinoline alkaloid biosynthetic pathway and its transcriptional regulation in lotus.莲中苄基异喹啉生物碱生物合成途径及其转录调控的研究
Hortic Res. 2018 Jun 1;5:29. doi: 10.1038/s41438-018-0035-0. eCollection 2018.
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Advances in the MYB-bHLH-WD Repeat (MBW) Pigment Regulatory Model: Addition of a WRKY Factor and Co-option of an Anthocyanin MYB for Betalain Regulation.MYB-bHLH-WD重复(MBW)色素调控模型的进展:添加一个WRKY因子以及花青素MYB被用于甜菜色素调控的共选择
Plant Cell Physiol. 2017 Sep 1;58(9):1431-1441. doi: 10.1093/pcp/pcx075.
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