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一株源自中国血流感染患者、携带 bla 基因的 IncN 质粒奇异变形杆菌的基因型特征。

Genotypic characterization of a Proteus mirabilis strain harboring bla on the IncN plasmid isolated from a patient with bloodstream infection in China.

机构信息

Department of Clinical Laboratory, Hangzhou Women's Hospital (Hangzhou Maternity and Child Health Care Hospital), Hangzhou 310051, Zhejiang, China.

Department of Infectious Diseases, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China; Key Laboratory of Microbial Technology and Bioinformatics of Zhejiang Province, Hangzhou, Zhejiang, China; Regional Medical Center for National Institute of Respiratory Diseases, Sir Run Run Shaw Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang, China.

出版信息

J Infect Public Health. 2023 Jul;16(7):1033-1036. doi: 10.1016/j.jiph.2023.04.020. Epub 2023 May 8.

Abstract

BACKGROUND

Carbapenemase is the predominant enzyme in the mechanism leading to Enterobacterales resistance to carbapenems, and the rapid spread of the bla gene is a major public health concern. Here, we describe a carbapenem-resistant Proteus mirabilis strain XH983, which harbored a bla-producing IncN plasmid, isolated from a bloodstream infection.

METHODS

Whole-genome sequencing and bioinformatics analysis were performed to assess the genetic environment of P. mirabilis XH983. Conjugation and transfer experiments were performed and the corresponding strains were confirmed by antimicrobial susceptibility testing. Phylogenetic and comparative genomic analysis were performed to explore the characteristics of carbapenem-resistant P. mirabilis isolates worldwide.

RESULTS

P. mirabilis XH983 was isolated from the blood of a patient in Hangzhou, China. The genome of XH983 contained one 4128,916 bp circular chromosome and one 24,225 bp IncN plasmid harboring bla. P. mirabilis XH983 had multiple resistance genes, conferring resistance to aminoglycosides [aph(3')-Ia, aph(3'')-Ib, aph(6)-Id, aac(3)-IId, aadA5, aadA1], β-lactams (bla, bla), phenicol (cat, catA1), sulphonamide/trimethoprim (drfA1, drfA17, sul1, sul2) and tetracycline [tet(J)]. The phylogenetic tree showed that XH983 was present in a cluster of 30 isolates, all of which carried bla and most of them came from the same hospital as XH983, indicating the clonal spread of the cluster.

CONCLUSION

We characterized carbapenem-resistant P. mirabilis clinical isolate XH983. The genome sequence of P. mirabilis XH983 provides information about resistance mechanisms of P. mirabilis carrying the bla plasmid and the potential spread of bla.

摘要

背景

碳青霉烯酶是肠杆菌科对碳青霉烯类药物产生耐药性的主要机制酶,bla 基因的快速传播是一个主要的公共卫生关注点。在这里,我们描述了一株从血流感染中分离的产碳青霉烯酶奇异变形杆菌 XH983 菌株,该菌株携带 bla 基因的 IncN 质粒。

方法

进行全基因组测序和生物信息学分析,以评估 P. mirabilis XH983 的遗传环境。进行了接合和转移实验,并通过抗菌药物敏感性试验确认了相应的菌株。进行了系统发育和比较基因组分析,以探索全球耐碳青霉烯奇异变形杆菌分离株的特征。

结果

P. mirabilis XH983 从中国杭州的一名患者的血液中分离得到。XH983 的基因组包含一个 4128916bp 的圆形染色体和一个 24225bp 的 IncN 质粒,该质粒携带 bla。P. mirabilis XH983 具有多种耐药基因,对氨基糖苷类药物(aph(3')-Ia、aph(3'')-Ib、aph(6)-Id、aac(3)-IId、aadA5、aadA1)、β-内酰胺类药物(bla、bla)、氯霉素(cat、catA1)、磺胺类/甲氧苄啶(drfA1、drfA17、sul1、sul2)和四环素类药物[tet(J)]具有耐药性。系统发育树显示,XH983 存在于 30 个分离株的一个聚类中,所有这些分离株都携带 bla 基因,其中大多数来自与 XH983 相同的医院,表明该聚类具有克隆传播的特征。

结论

我们对耐碳青霉烯奇异变形杆菌临床分离株 XH983 进行了表征。P. mirabilis XH983 的基因组序列提供了携带 bla 质粒的 P. mirabilis 的耐药机制信息,以及 bla 基因的潜在传播信息。

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