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调控哺乳动物颅骨进化和发育的景观。

-regulatory landscapes in the evolution and development of the mammalian skull.

机构信息

Max Planck Institute for Evolutionary Biology, Plön 24306, Germany.

出版信息

Philos Trans R Soc Lond B Biol Sci. 2023 Jul 3;378(1880):20220079. doi: 10.1098/rstb.2022.0079. Epub 2023 May 15.

DOI:10.1098/rstb.2022.0079
PMID:37183897
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10184250/
Abstract

Extensive morphological variation found in mammals reflects the wide spectrum of their ecological adaptations. The highest morphological diversity is present in the craniofacial region, where geometry is mainly dictated by the bony skull. Mammalian craniofacial development represents complex multistep processes governed by numerous conserved genes that require precise spatio-temporal control. A central question in contemporary evolutionary biology is how a defined set of conserved genes can orchestrate formation of fundamentally different structures, and therefore how morphological variability arises. In principle, differential gene expression patterns during development are the source of morphological variation. With the emergence of multicellular organisms, precise regulation of gene expression in time and space is attributed to -regulatory elements. These elements contribute to higher-order chromatin structure and together with -acting factors control transcriptional landscapes that underlie intricate morphogenetic processes. Consequently, divergence in -regulation is believed to rewire existing gene regulatory networks and form the core of morphological evolution. This review outlines the fundamental principles of the genetic code and genomic regulation interplay during development. Recent work that deepened our comprehension of -regulatory element origin, divergence and function is presented here to illustrate the state-of-the-art research that uncovered the principles of morphological novelty. This article is part of the theme issue 'The mammalian skull: development, structure and function'.

摘要

哺乳动物中广泛存在的形态变异反映了它们生态适应的广泛范围。形态多样性最高的是颅面区域,那里的几何形状主要由骨骼颅骨决定。哺乳动物颅面发育是由许多保守基因控制的复杂多步骤过程,需要精确的时空控制。当代进化生物学的一个核心问题是,一组特定的保守基因如何协调形成根本不同的结构,以及形态可变性是如何产生的。原则上,发育过程中的差异基因表达模式是形态变异的来源。随着多细胞生物的出现,基因在时间和空间上的精确表达调控归因于调控元件。这些元件有助于形成高级染色质结构,并与作用因子一起控制转录景观,为复杂的形态发生过程提供基础。因此,调控的差异被认为是重新布线现有的基因调控网络,并形成形态进化的核心。本文概述了发育过程中遗传密码和基因组调控相互作用的基本原理。本文介绍了最近加深我们对调控元件起源、分化和功能理解的工作,以说明揭示形态新颖性原理的最新研究进展。本文是主题为“哺乳动物颅骨:发育、结构和功能”的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/9d0ead554a49/rstb20220079f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/052593d5fa3c/rstb20220079f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/8bb364b083f4/rstb20220079f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/d8b1e321c873/rstb20220079f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/9d0ead554a49/rstb20220079f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/052593d5fa3c/rstb20220079f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/8bb364b083f4/rstb20220079f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/d8b1e321c873/rstb20220079f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e95e/10184250/9d0ead554a49/rstb20220079f04.jpg

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Genome Res. 2021 Sep;31(9):1573-1581. doi: 10.1101/gr.275212.121. Epub 2021 Jul 15.
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The -regulatory effects of modern human-specific variants.现代人类特异性变异的调节作用。
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A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome.猪基因组中顺式调控元件的纲要和比较表观基因组学分析。
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Transposable element-derived sequences in vertebrate development.脊椎动物发育过程中可转座元件衍生的序列。
Mob DNA. 2021 Jan 6;12(1):1. doi: 10.1186/s13100-020-00229-5.
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Insights Into the Complexity of Craniofacial Development From a Cellular Perspective.从细胞角度洞察颅面发育的复杂性
Front Cell Dev Biol. 2020 Dec 18;8:620735. doi: 10.3389/fcell.2020.620735. eCollection 2020.
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