Department of Molecular Biology, Umeå Centre for Microbial Research (UCMR), Umeå University, SE-90187 Umeå, Sweden.
Department of Molecular Biology, Umeå Centre for Microbial Research (UCMR), Umeå University, SE-90187 Umeå, Sweden.
Infect Genet Evol. 2023 Aug;112:105444. doi: 10.1016/j.meegid.2023.105444. Epub 2023 May 18.
Since the late 1930s, resistance to sulfonamides has been accumulating across bacterial species including Acinetobacter baumannii, an opportunistic pathogen increasingly implicated the spread of antimicrobial resistance worldwide. Our study aimed to explore events involved in the acquisition of sulfonamide resistance genes, particularly sul2, among the earliest available isolates of A. baumannii. The study utilized the genomic data of 19 strains of A. baumannii isolated before 1985. The whole genomes of 5 clinical isolates obtained from the Culture Collection University of Göteborg (CCUG), Sweden, were sequenced using the Illumina MiSeq system. Acquired resistance genes, insertion sequence elements and plasmids were detected using ResFinder, ISfinder and Plasmidseeker, respectively, while sequence types (STs) were assigned using the PubMLST Pasteur scheme. BLASTn was used to verify the occurrence of sul genes and to map their genetic surroundings. The sul1 and sul2 genes were detected in 4 and 9 isolates, respectively. Interestingly, sul2 appeared thirty years earlier than sul1. The sul2 gene was first located in the genomic island GIsul2 located on a plasmid, hereafter called NCTC7364p. With the emergence of international clone 1, the genetic context of sul2 evolved toward transposon Tn6172, which was also plasmid-mediated. Sulfonamide resistance in A. baumannii was efficiently acquired and transferred vertically, e.g., among the ST52 and ST1 isolates, as well as horizontally among non-related strains by means of a few efficient transposons and plasmids. Timely acquisition of the sul genes has probably contributed to the survival skill of A. baumannii under the high antimicrobial stress of hospital settings.
自 20 世纪 30 年代末以来,包括鲍曼不动杆菌在内的多种细菌对磺胺类药物的耐药性不断增加,这种机会性病原体的传播与全球抗菌药物耐药性的扩散密切相关。本研究旨在探索最早分离的鲍曼不动杆菌获得磺胺类药物耐药基因(尤其是 sul2)的相关事件。本研究利用了 19 株 1985 年前分离的鲍曼不动杆菌的基因组数据。使用 Illumina MiSeq 系统对从瑞典哥德堡大学培养物收集中心(CCUG)获得的 5 株临床分离株的全基因组进行测序。使用 ResFinder、ISfinder 和 Plasmidseeker 分别检测获得性耐药基因、插入序列元件和质粒,而序列类型(ST)则使用 PubMLST Pasteur 方案进行分配。BLASTn 用于验证 sul 基因的存在并绘制其遗传环境。在 4 株和 9 株分离株中分别检测到 sul1 和 sul2 基因。有趣的是,sul2 比 sul1 早出现了三十年。sul2 基因最初位于位于质粒上的基因组岛 GIsul2 中,此后称为 NCTC7364p。随着国际克隆 1 的出现,sul2 的遗传环境向转座子 Tn6172 进化,该转座子也是质粒介导的。鲍曼不动杆菌对磺胺类药物的耐药性可通过少数几种有效的转座子和质粒高效地进行垂直转移(例如在 ST52 和 ST1 分离株中)和水平转移(在非相关菌株中)。sul 基因的及时获得可能有助于鲍曼不动杆菌在医院环境中高抗菌压力下的生存技能。