Herbal Nanobiotechnology Lab, Pharmacology Division, CSIR-National Botanical Research Institute, Lucknow 226001, India.
Biochemistry, School of Biological and Chemical Sciences, College of Science & Engineering, University of Galway (Ollscoil na Gaillimhe), University Road, Galway City, Ireland.
Biotechnol Adv. 2023 Oct;67:108180. doi: 10.1016/j.biotechadv.2023.108180. Epub 2023 May 24.
The recent advancement in the human glycome and progress in the development of an inclusive network of glycosylation pathways allow the incorporation of suitable machinery for protein modification in non-natural hosts and explore novel opportunities for constructing next-generation tailored glycans and glycoconjugates. Fortunately, the emerging field of bacterial metabolic engineering has enabled the production of tailored biopolymers by harnessing living microbial factories (prokaryotes) as whole-cell biocatalysts. Microbial catalysts offer sophisticated means to develop a variety of valuable polysaccharides in bulk quantities for practical clinical applications. Glycans production through this technique is highly efficient and cost-effective, as it does not involve expensive initial materials. Metabolic glycoengineering primarily focuses on utilizing small metabolite molecules to alter biosynthetic pathways, optimization of cellular processes for glycan and glycoconjugate production, characteristic to a specific organism to produce interest tailored glycans in microbes, using preferably cheap and simple substrate. However, metabolic engineering faces one of the unique challenges, such as the need for an enzyme to catalyze desired substrate conversion when natural native substrates are already present. So, in metabolic engineering, such challenges are evaluated, and different strategies have been developed to overcome them. The generation of glycans and glycoconjugates via metabolic intermediate pathways can still be supported by glycol modeling achieved through metabolic engineering. It is evident that modern glycans engineering requires adoption of improved strain engineering strategies for creating competent glycoprotein expression platforms in bacterial hosts, in the future. These strategies include logically designing and introducing orthogonal glycosylation pathways, identifying metabolic engineering targets at the genome level, and strategically improving pathway performance (for example, through genetic modification of pathway enzymes). Here, we highlight current strategies, applications, and recent progress in metabolic engineering for producing high-value tailored glycans and their applications in biotherapeutics and diagnostics.
人类糖组学的最新进展和糖基化途径综合网络的发展进步,使得在非天然宿主中引入合适的蛋白质修饰机制成为可能,并为构建新一代定制化聚糖和糖缀合物探索了新的机会。幸运的是,细菌代谢工程这一新兴领域通过利用活的微生物工厂(原核生物)作为全细胞生物催化剂,使定制生物聚合物的生产成为可能。微生物催化剂为大量生产各种有价值的多糖提供了复杂的手段,可用于实际的临床应用。通过这种技术生产聚糖的效率非常高,成本效益也非常好,因为它不涉及昂贵的初始材料。代谢糖工程主要侧重于利用小分子代谢物来改变生物合成途径,优化细胞过程以生产聚糖和糖缀合物,针对特定生物体的特征来生产微生物中感兴趣的定制聚糖,最好使用廉价简单的底物。然而,代谢工程面临着独特的挑战之一,例如当天然存在的天然底物时,需要酶来催化所需的底物转化。因此,在代谢工程中,会评估这些挑战,并开发不同的策略来克服它们。通过代谢工程实现的糖代谢建模仍然可以支持通过代谢中间途径生成聚糖和糖缀合物。显然,未来现代聚糖工程需要采用改进的菌株工程策略,在细菌宿主中创建有能力的糖蛋白表达平台。这些策略包括逻辑设计和引入正交糖基化途径、在基因组水平上确定代谢工程靶点以及策略性地提高途径性能(例如,通过途径酶的遗传修饰)。在这里,我们重点介绍了代谢工程在生产高价值定制聚糖及其在生物治疗学和诊断学中的应用方面的当前策略、应用和最新进展。