Gao Yaning, Chen Liang, Li Jian, Wen Zhengjun
Beijing Jingmei Group General Hospital, Beijing, China.
Allergy Asthma Clin Immunol. 2023 May 27;19(1):43. doi: 10.1186/s13223-023-00796-1.
Severe asthma imposes a physical and economic burden on both patients and society. As chromatin regulators (CRs) influence the progression of multiple diseases through epigenetic mechanisms, we aimed to study the role of CRs in patients with severe asthma. Transcriptome data (GSE143303) from 47 patients with severe asthma and 13 healthy participants was downloaded from the Gene Expression Omnibus database. Enrichment analysis was performed to investigate the functions of differentially expressed CRs between the groups. We identified 80 differentially expressed CRs; they were mainly enriched in histone modification, chromatin organization, and lysine degradation. A protein-protein interaction network was then constructed. The analyzed immune scores were different between sick and healthy individuals. Thus, CRs with a high correlation in the immune analysis, SMARCC1, SETD2, KMT2B, and CHD8, were used to construct a nomogram model. Finally, using online prediction tools, we determined that lanatoside C, cefepime, and methapyrilene may be potentially effective drugs in the treatment of severe asthma. The nomogram constructed using the four CRs, SMARCC1, SETD2, KMT2B, and CHD8, may be a useful tool for predicting the prognosis of patients with severe asthma. This study provided new insights into the role of CRs in severe asthma.
重度哮喘给患者和社会都带来了身体和经济负担。由于染色质调控因子(CRs)通过表观遗传机制影响多种疾病的进展,我们旨在研究CRs在重度哮喘患者中的作用。从基因表达综合数据库下载了47例重度哮喘患者和13名健康参与者的转录组数据(GSE143303)。进行富集分析以研究两组之间差异表达的CRs的功能。我们鉴定出80个差异表达的CRs;它们主要富集在组蛋白修饰、染色质组织和赖氨酸降解方面。随后构建了蛋白质-蛋白质相互作用网络。患病个体和健康个体的分析免疫评分不同。因此,在免疫分析中具有高相关性的CRs,即SMARCC1、SETD2、KMT2B和CHD8,被用于构建列线图模型。最后,使用在线预测工具,我们确定毛花苷C、头孢吡肟和甲氧苄二胺可能是治疗重度哮喘的潜在有效药物。使用四个CRs(SMARCC1, SETD2, KMT2B和CHD8)构建的列线图可能是预测重度哮喘患者预后的有用工具。本研究为CRs在重度哮喘中的作用提供了新的见解。