Jerzy Haber Institute of Catalysis and Surface Chemistry Polish Academy of Sciences, Kraków, Poland.
SYNMIKRO Research Center and Department of Chemistry, Philipps-University of Marburg, Marburg, Germany.
Sci Adv. 2023 Jun 2;9(22):eadg6689. doi: 10.1126/sciadv.adg6689.
Aldehyde oxidoreductases (AORs) are tungsten enzymes catalyzing the oxidation of many different aldehydes to the corresponding carboxylic acids. In contrast to other known AORs, the enzyme from the denitrifying betaproteobacterium (AOR) consists of three different subunits (AorABC) and uses nicotinamide adenine dinucleotide (NAD) as an electron acceptor. Here, we reveal that the enzyme forms filaments of repeating AorAB protomers that are capped by a single NAD-binding AorC subunit, based on solving its structure via cryo-electron microscopy. The polyferredoxin-like subunit AorA oligomerizes to an electron-conducting nanowire that is decorated with enzymatically active and W-cofactor (W-co) containing AorB subunits. Our structure further reveals the binding mode of the native substrate benzoate in the AorB active site. This, together with quantum mechanics:molecular mechanics (QM:MM)-based modeling for the coordination of the W-co, enables formulation of a hypothetical catalytic mechanism that paves the way to further engineering for applications in synthetic biology and biotechnology.
醛氧化还原酶(AOR)是一类钨酶,能够催化多种不同醛氧化为相应的羧酸。与其他已知的 AOR 不同,来自反硝化β-变形菌的酶(AOR)由三个不同的亚基(AorABC)组成,并使用烟酰胺腺嘌呤二核苷酸(NAD)作为电子受体。在此,我们通过冷冻电镜解析其结构,揭示了该酶形成重复 AorAB 原聚体的纤维,这些纤维由单个 NAD 结合 AorC 亚基封顶。基于多聚类似铁氧还蛋白的亚基 AorA 寡聚化为电子传导纳米线,该纳米线上装饰有具有酶活性和含有 W-辅因子(W-co)的 AorB 亚基。我们的结构进一步揭示了天然底物苯甲酸在 AorB 活性位点的结合模式。这一点,加上基于量子力学:分子力学(QM:MM)的 W-co 配位建模,为假设的催化机制提供了依据,为进一步应用于合成生物学和生物技术的工程设计铺平了道路。