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铜(I)离子对 XIAP-RING 结构域锌(II)结合和二聚体蛋白结构的破坏。

Disruption of zinc (II) binding and dimeric protein structure of the XIAP-RING domain by copper (I) ions.

机构信息

Department of Chemistry, Macalester College, 1600 Grand Avenue, Saint Paul, MN, 55105, USA.

出版信息

J Biol Inorg Chem. 2023 Aug;28(5):485-494. doi: 10.1007/s00775-023-02002-4. Epub 2023 Jun 2.

DOI:10.1007/s00775-023-02002-4
PMID:37268744
Abstract

Modulation of metalloprotein structure and function via metal ion substitution may constitute a molecular basis for metal ion toxicity and/or metal-mediated functional control. The X-linked Inhibitor of Apoptosis Protein (XIAP) is a metalloprotein that requires zinc for proper structure and function. In addition to its role as a modulator of apoptosis, XIAP has been implicated in copper homeostasis. Given the similar coordination preferences of copper and zinc, investigation of XIAP structure and function upon interaction with copper is relevant. The Really Interesting New Gene (RING) domain of XIAP is representative of a class of zinc finger proteins that utilize a bi-nuclear zinc-binding motif to maintain proper structure and ubiquitin ligase function. Herein, we report the characterization of copper (I) binding to the Zn-RING domain of XIAP. Electronic absorption studies that monitor copper-thiolate interactions demonstrate that the RING domain of XIAP binds 5-6 Cu(I) ions and that copper is thermodynamically preferred relative to zinc. Repetition of the experiments in the presence of the Zn(II)-specific dye Mag-Fura2 shows that Cu(I) addition results in Zn(II) ejection from the protein, even in the presence of glutathione. Loss of dimeric structure of the RING domain, which is a requirement for its ubiquitin ligase activity, upon copper substitution at the zinc-binding sites, was readily observed via size exclusion chromatography. These results provide a molecular basis for the modulation of RING function by copper and add to the growing body of literature that describe the impact of Cu(I) on zinc metalloprotein structure and function.

摘要

通过金属离子取代来调节金属蛋白酶的结构和功能,可能构成了金属离子毒性和/或金属介导的功能调控的分子基础。X 连锁凋亡抑制蛋白(XIAP)是一种需要锌才能保持正确结构和功能的金属蛋白酶。除了作为凋亡调节剂的作用外,XIAP 还与铜稳态有关。鉴于铜和锌的配位偏好相似,研究 XIAP 与铜相互作用时的结构和功能具有重要意义。XIAP 的 Really Interesting New Gene(RING)结构域代表了一类锌指蛋白,它们利用双核锌结合基序来维持正确的结构和泛素连接酶功能。在此,我们报告了铜(I)与 XIAP 的 Zn-RING 结构域结合的特征。监测铜-硫醇相互作用的电子吸收研究表明,XIAP 的 RING 结构域结合 5-6 个 Cu(I)离子,并且铜在热力学上优先于锌。在存在 Zn(II)特异性染料 Mag-Fura2 的情况下重复实验表明,即使存在谷胱甘肽,Cu(I)的加入也会导致蛋白质中 Zn(II)的排出。铜取代锌结合位点后,RING 结构域的二聚体结构丢失,这是其泛素连接酶活性的要求,这通过尺寸排阻色谱很容易观察到。这些结果为铜对 RING 功能的调节提供了分子基础,并为越来越多的描述 Cu(I)对锌金属蛋白酶结构和功能影响的文献增添了内容。

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本文引用的文献

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Copper induces cell death by targeting lipoylated TCA cycle proteins.铜通过靶向脂酰化 TCA 循环蛋白诱导细胞死亡。
Science. 2022 Mar 18;375(6586):1254-1261. doi: 10.1126/science.abf0529. Epub 2022 Mar 17.
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Cu(I) Binding to Designed Proteins Reveals a Putative Copper Binding Site of the Human Line1 Retrotransposon Protein ORF1p.设计蛋白与 Cu(I)的结合揭示了人 LINE1 逆转录转座子蛋白 ORF1p 的一个潜在铜结合位点。
Inorg Chem. 2022 Mar 28;61(12):5084-5091. doi: 10.1021/acs.inorgchem.2c00057. Epub 2022 Mar 14.
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The Bioinorganic Chemistry of Mammalian Metallothioneins.哺乳动物金属硫蛋白的生物无机化学
Chem Rev. 2021 Dec 8;121(23):14594-14648. doi: 10.1021/acs.chemrev.1c00371. Epub 2021 Oct 15.
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Cadmium Exchange with Zinc in the Non-Classical Zinc Finger Protein Tristetraprolin.三肽重复蛋白 Tristetraprolin 中非经典锌指蛋白中的镉与锌的交换。
Inorg Chem. 2021 Jun 7;60(11):7697-7707. doi: 10.1021/acs.inorgchem.0c03808. Epub 2021 May 17.
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Role of Gold in Inflammation and Tristetraprolin Activity.金在炎症和三磷酸鸟苷环化水解酶活性中的作用。
Chemistry. 2020 Feb 3;26(7):1535-1547. doi: 10.1002/chem.201904837. Epub 2020 Jan 16.
7
Emerging investigator series: characterization of silver and silver nanoparticle interactions with zinc finger peptides.新兴研究者系列:银和银纳米颗粒与锌指肽相互作用的表征
Environ Sci Nano. 2019 Aug 1;6(8):2367-2378. doi: 10.1039/C9EN00065H. Epub 2019 Jul 19.
8
Third BIR domain of XIAP binds to both Cu(II) and Cu(I) in multiple sites and with diverse affinities characterized at atomic resolution.XIAP 的第三个 BIR 结构域以原子分辨率表征,以不同的亲和力结合到多个位点的 Cu(II)和 Cu(I)。
Sci Rep. 2019 May 15;9(1):7428. doi: 10.1038/s41598-019-42875-7.
9
Ni(II), Hg(II), and Pb(II) Coordination in the Prokaryotic Zinc-Finger Ros87.原核锌指蛋白 Ros87 中的 Ni(II)、Hg(II) 和 Pb(II) 配位
Inorg Chem. 2019 Jan 22;58(2):1067-1080. doi: 10.1021/acs.inorgchem.8b02201. Epub 2018 Dec 31.
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