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卵裂模式的图论分析:图发育系统及其在海鞘卵卵裂模式中的应用:(图论/图发育系统/卵裂模式/海鞘卵)

Graph-Theoretical Analysis of Cleavage Pattern: Graph Developmental System and Its Application to Cleavage Pattern of Ascidian Egg: (graph theory/graph developmental system/cleavage pattern/ascidian egg).

作者信息

Doi Hirofumi

机构信息

Department of Biophysics, Faculty of Science, Kyoto University, Kyoto 606, Japan.

出版信息

Dev Growth Differ. 1984;26(1):49-60. doi: 10.1111/j.1440-169X.1984.00049.x.

Abstract

The skeletal structure of the embryo is represented by the graph. In the graph, the cells and the connectivities between the cells are reduced to the nodes and edges, respectively. Along cleavage history, the series of graphs is obtained. In this paper I propose a new graph developmental system(GDS) which develops the series of graphs. And I represent and analyze the cleavage pattern of the ascidian egg by GDS. In order to represent it by GDS, at first, the connectivities between the cells are labeled according to the developments of the connectivities at the next time step, and next the cells are labeled. But there are two ways of labeling the cells, then two types of GDS are defined: (1) to label according to the pattern of the connectivities of their descendant cells after two time steps (G-GDS), (2) to label according to the cell fates (C-GDS). The C-GDS of the ascidian egg produces 16 cleavage patterns at 64-cell stage non-deterministically. If some labels are distinguished at 16-cell stage, the C-GDS becomes deterministic at 64-cell stage. GDS will be useful to simulate morphogenesis by the computer graphics.

摘要

胚胎的骨骼结构由该图表示。在图中,细胞以及细胞之间的连接性分别简化为节点和边。沿着卵裂历史,可以得到一系列的图。在本文中,我提出了一种新的图发育系统(GDS),它可以生成这一系列的图。并且我用GDS来表示和分析海鞘卵的卵裂模式。为了用GDS来表示它,首先,根据下一个时间步的连接性发育情况对细胞之间的连接性进行标记,然后对细胞进行标记。但是有两种标记细胞的方式,于是定义了两种类型的GDS:(1)根据两个时间步后其后代细胞的连接性模式进行标记(G-GDS),(2)根据细胞命运进行标记(C-GDS)。海鞘卵的C-GDS在64细胞阶段非确定性地产生16种卵裂模式。如果在16细胞阶段区分一些标记,C-GDS在64细胞阶段就会变成确定性的。GDS对于通过计算机图形学模拟形态发生将是有用的。

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