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不同糖浓度桃果实的转录组共表达网络分析揭示了参与耐寒性的糖代谢关键调控因子。

Transcriptome Co-Expression Network Analysis of Peach Fruit with Different Sugar Concentrations Reveals Key Regulators in Sugar Metabolism Involved in Cold Tolerance.

作者信息

Wang Lufan, Zheng Xiaolin, Ye Zhengwen, Su Mingshen, Zhang Xianan, Du Jihong, Li Xiongwei, Zhou Huijuan, Huan Chen

机构信息

Forestry and Fruit Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai 201403, China.

College of Food Science and Biotechnology, Zhejiang Gongshang University, Hangzhou 310018, China.

出版信息

Foods. 2023 Jun 1;12(11):2244. doi: 10.3390/foods12112244.

Abstract

Peach fruits are known to be highly susceptible to chilling injury (CI) during low-temperature storage, which has been linked to the level of sugar concentration in the fruit. In order to better understand the relationship between sugar metabolism and CI, we conducted a study examining the concentration of sucrose, fructose, and glucose in peach fruit with different sugar concentrations and examined their relationship with CI. Through transcriptome sequencing, we screened the functional genes and transcription factors (TFs) involved in the sugar metabolism pathway that may cause CI in peach fruit. Our results identified five key functional genes (, , , , and ) and eight TFs (, , , , and ) that are associated with sugar metabolism and CI development. The analysis of co-expression network mapping and binding site prediction identified the most likely associations between these TFs and functional genes. This study provides insights into the metabolic and molecular mechanisms regulating sugar changes in peach fruit with different sugar concentrations and presents potential targets for breeding high-sugar and cold-tolerant peach varieties.

摘要

众所周知,桃果实在低温贮藏期间极易受到冷害(CI),这与果实中的糖浓度水平有关。为了更好地理解糖代谢与冷害之间的关系,我们开展了一项研究,检测了不同糖浓度桃果实中蔗糖、果糖和葡萄糖的浓度,并研究了它们与冷害的关系。通过转录组测序,我们筛选出了参与可能导致桃果实冷害的糖代谢途径的功能基因和转录因子(TFs)。我们的结果鉴定出了五个与糖代谢和冷害发展相关的关键功能基因(、、、和)以及八个转录因子(、、、、和)。共表达网络图谱分析和结合位点预测确定了这些转录因子与功能基因之间最可能的关联。本研究深入了解了调控不同糖浓度桃果实中糖变化的代谢和分子机制,并提出了培育高糖且耐寒桃品种的潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1456/10252351/1f0f0df8132f/foods-12-02244-g001.jpg

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