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一种新型工具箱,用于精确调控地衣芽孢杆菌中的基因表达和代谢工程。

A novel toolbox for precise regulation of gene expression and metabolic engineering in Bacillus licheniformis.

机构信息

State Key Laboratory of Biocatalysis and Enzyme Engineering, Environmental Microbial Technology Center of Hubei Province, College of Life Sciences, Hubei University, Wuhan, 430062, PR China.

State Key Laboratory of Biocatalysis and Enzyme Engineering, Environmental Microbial Technology Center of Hubei Province, College of Life Sciences, Hubei University, Wuhan, 430062, PR China.

出版信息

Metab Eng. 2023 Jul;78:159-170. doi: 10.1016/j.ymben.2023.06.004. Epub 2023 Jun 10.

Abstract

Despite industrial bio-manufacturing progress using Bacillus licheniformis, the absence of a well-characterized toolbox allowing precise regulation of multiple genes limits its expansion for basic research and application. Here, a novel gene expression toolbox (GET) was developed for precise regulation of gene expression and high-level production of 2-phenylethanol. Firstly, we established a novel promoter core region mosaic combination model to combine, characterize and analyze different core regions. Characterization and orthogonal design of promoter ribbons allowed convenient construction of an adaptable and robust GET, gene gfp expression intensity was 0.64%-16755.77%, with a dynamic range of 2.61 × 10 times, which is the largest regulatory range of GET in Bacillus based on modification of promoter P43. Then we verified the protein and species universality of GET using different proteins expressed in B. licheniformis and Bacillus subtilis. Finally, the GET for 2-phenylethanol metabolic breeding, resulting in a plasmid-free strain producing 6.95 g/L 2-phenylethanol with a yield and productivity of 0.15 g/g glucose and 0.14 g/L/h, respectively, the highest de novo synthesis yield of 2-phenylethanol reported. Taken together, this is the first report elucidating the impact of mosaic combination and tandem of multiple core regions to initiate transcription and improve the output of proteins and metabolites, which provides strong support for gene regulation and diversified product production in Bacillus.

摘要

尽管利用地衣芽孢杆菌在工业生物制造方面取得了进展,但缺乏一个功能良好的工具盒来精确调控多个基因,限制了其在基础研究和应用方面的扩展。在这里,开发了一种新的基因表达工具盒(GET),用于精确调控基因表达和 2-苯乙醇的高产。首先,我们建立了一种新的启动子核心区镶嵌组合模型,用于组合、表征和分析不同的核心区。启动子彩带的特性和正交设计允许方便地构建一个适应性强、稳健的 GET,基因 gfp 的表达强度为 0.64%-16755.77%,动态范围为 2.61×10 倍,这是基于启动子 P43 修饰的 Bacillus 中 GET 的最大调控范围。然后,我们使用在地衣芽孢杆菌和枯草芽孢杆菌中表达的不同蛋白质验证了 GET 的蛋白质和物种通用性。最后,对 2-苯乙醇代谢进行了遗传选育,得到了一株无质粒的菌株,生产 6.95 g/L 的 2-苯乙醇,其葡萄糖得率和生产率分别为 0.15 g/g 和 0.14 g/L/h,是报道的 2-苯乙醇从头合成的最高得率。总之,这是首次报道通过镶嵌组合和多个核心区串联启动转录来提高蛋白质和代谢产物的产量,为芽孢杆菌中的基因调控和多样化产品生产提供了有力支持。

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