Department of Cardiovascular Medicine, the First Affiliated Hospital of Nanjing Medical University, Guangzhou Road 300, Nanjing, Jiangsu Province, 210029, China.
Department of Geriatric, the First Affiliated Hospital of Nanjing Medical University, Guangzhou Road 300, Nanjing, Jiangsu Province, 210029, China.
BMC Med Genomics. 2023 Jun 14;16(1):131. doi: 10.1186/s12920-023-01540-9.
Recent studies suggest that classical coronary risk factors play a significant role in the pathogenesis of coronary artery disease. Our study aims to explore the interaction of circRNA with classical coronary risk factors in coronary atherosclerotic disease.
Combined analysis of RNA sequencing results from coronary segments and peripheral blood mononuclear cells of patients with coronary atherosclerotic disease was employed to identify critical circRNAs. Competing endogenous RNA networks were constructed by miRanda-3.3a and TargetScan7.0. The relative expression quantity of circRNA in peripheral blood mononuclear cells was determined by qRT-PCR in a large cohort including 256 patients and 49 controls. Spearman's correlation test, receiver operating characteristic curve analysis, multivariable logistic regression analysis, one-way analysis of variance, and crossover analysis were performed.
A total of 34 circRNAs were entered into our study, hsa_circRPRD1A, hsa_circHERPUD2, hsa_circLMBR1, and hsa_circDHTKD1 were selected for further investigation. A circRNA-miRNA-mRNA network is composed of 20 microRNAs and 66 mRNAs. The expression of hsa_circRPRD1A (P = 0.004) and hsa_circHERPUD2 (P = 0.003) were significantly down-regulated in patients with coronary artery disease compared to controls. The area under the curve of hsa_circRPRD1A and hsa_circHERPUD2 is 0.689 and 0.662, respectively. Univariate and multivariable logistic regression analyses identified hsa_circRPRD1A (OR = 0.613, 95%CI:0.380-0.987, P = 0.044) as a protective factor for coronary artery disease. Based on the additive model, crossover analysis demonstrated that there was an antagonistic interaction between the expression of hsa_circHERPUD2 and alcohol consumption in subjects with coronary artery disease.
Our findings imply that hsa_circRPRD1A and hsa_circHERPUD2 could be used as biomarkers for the diagnosis of coronary artery disease and provide epidemiological support for the interactions between circRNAs and classical coronary risk factors.
最近的研究表明,经典的冠心病危险因素在冠状动脉疾病的发病机制中起重要作用。我们的研究旨在探讨 circRNA 与冠心病患者冠状动脉粥样硬化性疾病的经典冠心病危险因素的相互作用。
对冠心病患者的冠状动脉节段和外周血单个核细胞的 RNA 测序结果进行联合分析,以鉴定关键 circRNA。通过 miRanda-3.3a 和 TargetScan7.0 构建竞争性内源性 RNA 网络。在包括 256 例患者和 49 例对照的大样本中,通过 qRT-PCR 测定外周血单个核细胞中 circRNA 的相对表达量。进行 Spearman 相关检验、受试者工作特征曲线分析、多变量逻辑回归分析、单因素方差分析和交叉分析。
共纳入 34 个 circRNA,进一步选择 hsa_circRPRD1A、hsa_circHERPUD2、hsa_circLMBR1 和 hsa_circDHTKD1 进行研究。由 20 个 microRNAs 和 66 个 mRNAs 组成 circRNA-miRNA-mRNA 网络。与对照组相比,冠心病患者 hsa_circRPRD1A(P=0.004)和 hsa_circHERPUD2(P=0.003)的表达明显下调。hsa_circRPRD1A 和 hsa_circHERPUD2 的曲线下面积分别为 0.689 和 0.662。单因素和多因素逻辑回归分析发现 hsa_circRPRD1A(OR=0.613,95%CI:0.380-0.987,P=0.044)是冠心病的保护因素。基于加性模型,交叉分析表明在冠心病患者中,hsa_circHERPUD2 的表达与饮酒之间存在拮抗相互作用。
我们的研究结果表明,hsa_circRPRD1A 和 hsa_circHERPUD2 可以作为冠心病诊断的生物标志物,并为 circRNA 与经典冠心病危险因素的相互作用提供流行病学支持。