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世代暴露于海洋酸化会影响欧洲鲈鱼(Dicentrarchus labrax)的肝脏转录组。

Transgenerational exposure to ocean acidification impacts the hepatic transcriptome of European sea bass (Dicentrarchus labrax).

机构信息

IFREMER, SEBIMER, Plouzané, 29280, France.

IFREMER, PHYTNESS, Univ Brest, CNRS, IRD, LEMAR, Plouzané, 29280, France.

出版信息

BMC Genomics. 2023 Jun 15;24(1):331. doi: 10.1186/s12864-023-09353-x.

Abstract

Physiological effects of ocean acidification associated with elevated CO2 concentrations in seawater is the subject of numerous studies in teleost fish. While the short time within-generation impact of ocean acidification (OA) on acid-base exchange and energy metabolism is relatively well described, the effects associated with transgenerational exposure to OA are much less known. Yet, the impacts of OA can vary in time with the potential for acclimation or adaptation of a species. Previous studies in our lab demonstrated that transgenerational exposure to OA had extensive effects on the transcriptome of the olfactory epithelium of European sea bass (Dicentrarchus labrax), especially on genes related to ion balance, energy metabolism, immune system, synaptic plasticity, neuron excitability and wiring. In the present study, we complete the previous work by investigating the effect of transgenerational exposure to OA on the hepatic transcriptome of European sea bass. Differential gene expression analysis was performed by RNAseq technology on RNA extracted from the liver of two groups of 18 months F2 juveniles that had been exposed since spawning to the same AO conditions as their parents (F1) to either actual pH or end-of-century predicted pH levels (IPCC RCP8.5), respectively. Here we show that transgenerational exposure to OA significantly impacts the expression of 236 hepatic transcripts including genes mainly involved in inflammatory/immune responses but also in carbohydrate metabolism and cellular homeostasis. Even if this transcriptomic impact is relatively limited compared to what was shown in the olfactory system, this work confirmed that fish transgenerationally exposed to OA exhibit molecular regulation of processes related to metabolism and inflammation. Also, our data expand the up-regulation of a key gene involved in different physiological pathways including calcium homeostasis (i.e. pthr1), which we already observed in the olfactory epithelium, to the liver. Even if our experimental design does not allow to discriminate direct within F2 generation effects from transgenerational plasticity, these results offer the perspective of more functional analyses to determine the potential physiological impact of OA exposure on fish physiology with ecological relevance.

摘要

海水二氧化碳浓度升高引起的酸化对鱼类生理的影响是众多研究的主题。虽然酸化(OA)对酸碱交换和能量代谢的短期代际影响已经得到了较为详细的描述,但与代际接触 OA 相关的影响却知之甚少。然而,OA 的影响随着物种适应或进化的潜力而变化。我们实验室的先前研究表明,代际接触 OA 对欧欧鳜(Dicentrarchus labrax)嗅觉上皮的转录组产生了广泛影响,特别是对与离子平衡、能量代谢、免疫系统、突触可塑性、神经元兴奋性和连接相关的基因。在本研究中,我们通过研究代际接触 OA 对欧洲海鲈肝脏转录组的影响,完成了先前的工作。通过 RNAseq 技术对从两组 18 个月 F2 幼鱼肝脏中提取的 RNA 进行差异基因表达分析,这两组幼鱼从产卵开始就一直暴露于与父母(F1)相同的 AO 条件下,分别暴露于实际 pH 值或本世纪末预测的 pH 值(IPCC RCP8.5)。结果表明,代际接触 OA 显著影响了 236 个肝脏转录本的表达,包括主要参与炎症/免疫反应的基因,但也包括碳水化合物代谢和细胞内稳态的基因。尽管与嗅觉系统相比,这种转录组的影响相对较小,但这项工作证实,暴露于 OA 的鱼类表现出与代谢和炎症相关的过程的分子调控。此外,我们的数据将与钙稳态(即 pthr1)等不同生理途径相关的关键基因的上调扩展到肝脏,这一基因在嗅觉上皮中已经观察到。即使我们的实验设计不能区分 F2 代内的直接影响与代际可塑性,但这些结果为更具功能性的分析提供了可能性,以确定 OA 暴露对鱼类生理学的潜在生理影响及其与生态的相关性。

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